Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
DDX41Q9UJV9 MTND4P23-201ENST00000447723 1363 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 SNORA16.2-201ENST00000390991 127 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 RPS20P14-201ENST00000412545 360 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC074085.1-201ENST00000413598 418 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 RPLP0P7-201ENST00000416050 667 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AL590383.1-201ENST00000428602 75 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 GTF2IP13-201ENST00000438487 386 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 TXNP1-201ENST00000441872 371 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC078817.1-201ENST00000492623 435 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 RN7SL812P-201ENST00000493791 279 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AP002812.1-201ENST00000495378 474 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC078918.1-201ENST00000498515 228 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 RNU2-69P-201ENST00000516061 100 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 Y_RNA.682-201ENST00000516457 100 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 RNU6-256P-201ENST00000516747 97 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC090115.3-201ENST00000553218 849 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AL360157.1-201ENST00000565962 87 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 MIR3942-201ENST00000585264 109 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC104662.1-201ENST00000604448 511 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AL354984.3-201ENST00000604803 325 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 ATP1B3P1-201ENST00000605365 821 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AL138721.1-201ENST00000616756 179 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 MIR8059-201ENST00000620427 81 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC091905.2-201ENST00000623143 306 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AC022418.1-201ENST00000624118 445 ntBASIC4.91□□□□□ -1.62
DDX41Q9UJV9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.91□□□□□ -1.62
DDX41Q9UJV9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
DDX41Q9UJV9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.9□□□□□ -1.62
DDX41Q9UJV9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
DDX41Q9UJV9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
DDX41Q9UJV9 UBE2L2-201ENST00000254302 429 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 RNU1-15P-201ENST00000353977 144 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 RNA5SP388-201ENST00000362584 119 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 RNU6-254P-201ENST00000363377 107 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 RNU1-13P-201ENST00000384499 162 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 MIR450B-201ENST00000401182 78 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AL022722.2-201ENST00000402519 180 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 RNA5SP306-201ENST00000411087 107 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 BTF3L4P3-201ENST00000418879 476 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AL157831.1-201ENST00000426134 473 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 RPL23AP89-201ENST00000439324 255 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 Y_RNA.632-201ENST00000459189 102 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AC023141.12-201ENST00000512399 199 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 APOOP4-201ENST00000513530 597 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 SNORA14.1-201ENST00000516113 141 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 RNU6-914P-201ENST00000516749 109 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 CYCSP27-201ENST00000527643 293 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 MTCO3P23-201ENST00000561363 289 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 VN1R85P-201ENST00000601587 426 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AL021997.2-201ENST00000615674 271 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 C2orf27A-204ENST00000623058 969 ntBASIC4.9□□□□□ -1.63
DDX41Q9UJV9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
DDX41Q9UJV9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 HSPA8P4-201ENST00000511877 1920 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 FAM35DP-201ENST00000323387 2712 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 RNA5SP167-201ENST00000365461 116 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 RNU6-45P-201ENST00000384471 107 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 MTCO2P27-201ENST00000420740 428 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 RPL23AP69-201ENST00000431134 458 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 AC007677.1-201ENST00000445757 515 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 AC091153.1-201ENST00000466297 402 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 RPL35AP15-201ENST00000468042 339 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 RPL31P60-201ENST00000478450 367 ntBASIC4.89□□□□□ -1.63
DDX41Q9UJV9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.89□□□□□ -1.63
DDX41Q9UJV9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms