Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC023421.1-201ENST00000590535 1785 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC008568.2-201ENST00000623862 2313 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 MIR335-201ENST00000362173 94 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 RNU6-200P-201ENST00000364743 107 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 SNORA12.2-201ENST00000391040 156 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 RNA5SP241-201ENST00000391326 114 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 RNU2-25P-201ENST00000411041 191 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 RNU6-130P-201ENST00000411112 103 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 TOMM22P1-201ENST00000418578 312 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC098614.2-201ENST00000426040 255 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 SDAD1P3-201ENST00000427380 333 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 PIGFP3-201ENST00000441918 722 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 KC877373.1-201ENST00000479066 408 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.673-201ENST00000516306 88 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 SNORA70.16-201ENST00000516390 95 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.700-201ENST00000516806 100 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 RNA5SP373-201ENST00000517271 95 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC023575.1-201ENST00000580510 358 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC012433.1-201ENST00000588916 398 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 Mico1.1-201ENST00000611698 204 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 U4.7-201ENST00000638126 106 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 AC139713.2-214ENST00000642059 1811 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 SCARNA15-201ENST00000607520 4325 ntBASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
FOXD3Q9UJU5 MAPK10-263ENST00000641052 4307 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 RNU6-428P-201ENST00000362942 107 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 RN7SKP103-201ENST00000363848 320 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 U3.15-201ENST00000365398 212 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.416-201ENST00000384014 113 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.458-201ENST00000384240 102 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 RNU1-106P-201ENST00000384382 164 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 MIR585-201ENST00000384887 94 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 RAC1P3-201ENST00000416129 580 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 RPL21P91-201ENST00000429231 479 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 RPL19P16-201ENST00000433839 588 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AC004383.1-201ENST00000438135 289 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AC022133.1-201ENST00000490961 571 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 RN7SL290P-201ENST00000578661 300 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AC006557.5-201ENST00000603126 811 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AC099506.2-201ENST00000623074 221 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 BMS1P21-201ENST00000634565 365 ntBASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXD3Q9UJU5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 Y_RNA.105-201ENST00000363182 111 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 RN7SKP153-201ENST00000365026 316 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MIR105-1-201ENST00000385222 81 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 RNU6-121P-201ENST00000410525 99 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 RNU6-1203P-201ENST00000410703 110 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 RPL21P38-201ENST00000418090 167 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AL590135.1-201ENST00000422215 156 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 Z82210.1-201ENST00000440037 231 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AC124916.1-201ENST00000444020 547 ntBASIC4.69□□□□□ -1.66
FOXD3Q9UJU5 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms