Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HMGB1P28-201ENST00000507778 552 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC008628.1-201ENST00000508663 265 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC008834.1-201ENST00000511612 175 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 IGLV2-28-201ENST00000520681 304 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MTCO3P15-201ENST00000526563 574 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 SLC2A13P1-201ENST00000531560 322 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 GNAI2P1-201ENST00000541815 315 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 OR8R1P-201ENST00000543943 764 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 SNRPGP1-201ENST00000553864 222 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC079148.1-201ENST00000565944 819 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC022254.1-201ENST00000567857 235 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MIR3167-201ENST00000579623 85 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AL031274.2-201ENST00000599419 203 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 BNIP3P23-201ENST00000599655 511 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 CKS1BP3-201ENST00000600888 237 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AL023583.1-201ENST00000607518 1143 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC011939.3-201ENST00000613686 466 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MIR6774-201ENST00000614651 70 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MLECP1-201ENST00000615893 709 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AL109620.1-201ENST00000618738 1197 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MIR6813-201ENST00000621638 56 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AP000346.3-201ENST00000622821 210 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 AC093591.3-201ENST00000634516 308 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 Z99571.1-201ENST00000636677 394 ntBASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CDC42SE1Q9NRR8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-609P-201ENST00000365459 107 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-468P-201ENST00000384003 109 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 VN1R12P-201ENST00000403778 876 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 RNU2-63P-201ENST00000410792 194 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC068533.2-201ENST00000411872 306 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 MTND1P21-201ENST00000412991 285 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 BTF3P8-201ENST00000414577 526 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 USP9YP26-201ENST00000421008 661 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 RPF2P1-201ENST00000424137 906 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 PTGES3P4-201ENST00000426243 356 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 RPL7P34-201ENST00000433316 712 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC006028.1-201ENST00000438379 402 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 USP9YP15-201ENST00000442391 422 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 MTND6P13-201ENST00000443510 523 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AL357134.1-201ENST00000445848 426 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 MTCYBP16-201ENST00000509187 1129 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA4.4-201ENST00000515921 135 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-583P-201ENST00000516012 92 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 COX6CP8-201ENST00000522620 226 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 FAM92A1P1-201ENST00000528023 890 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC011611.1-201ENST00000552179 197 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC090079.2-201ENST00000575289 768 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AL161798.1-201ENST00000604630 131 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC009974.1-201ENST00000608881 455 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AL442067.2-201ENST00000614033 363 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC009831.4-201ENST00000620744 325 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AC093875.1-201ENST00000623688 504 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 CDR1-202ENST00000625883 1485 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 MIR492-201ENST00000638676 116 ntBASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CDC42SE1Q9NRR8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 SNORD62.1-201ENST00000362541 86 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-1167P-201ENST00000363227 94 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 SNORA25B-201ENST00000365507 128 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 Y_RNA.408-201ENST00000383987 102 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RNU6-1207P-201ENST00000384343 107 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 MIR218-2-201ENST00000385006 110 ntBASIC1.01□□□□□ -2.25
CDC42SE1Q9NRR8 RNU2-68P-201ENST00000410878 191 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms