Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP005435.4-201ENST00000529514 284 ntBASIC4.31□□□□□ -1.72
VTA1Q9NP79 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 UBE2V2P2-201ENST00000587677 504 ntBASIC4.31□□□□□ -1.72
VTA1Q9NP79 AC018638.8-201ENST00000588755 281 ntBASIC4.31□□□□□ -1.72
VTA1Q9NP79 AL591424.2-201ENST00000617023 128 ntBASIC4.31□□□□□ -1.72
VTA1Q9NP79 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VTA1Q9NP79 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VTA1Q9NP79 OR4G1P-203ENST00000641984 1631 ntBASIC4.31□□□□□ -1.72
VTA1Q9NP79 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
VTA1Q9NP79 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 Y_RNA.279-201ENST00000364763 95 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 RPS29P4-201ENST00000414733 161 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 TOMM22P1-201ENST00000418578 312 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 CYP4F29P-201ENST00000420685 446 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 AL451054.2-201ENST00000420896 202 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 MTCYBP8-201ENST00000422855 651 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 RPL21P66-201ENST00000426566 466 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 HSPD1P21-201ENST00000436541 245 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 RPL7P28-201ENST00000437739 740 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 CBWD4P-201ENST00000445695 655 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 RPL21P104-201ENST00000464143 478 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 EIF4EP3-201ENST00000498782 656 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 LRRC34P2-201ENST00000514850 553 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 RN7SKP18-201ENST00000516005 275 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 ADI1P3-201ENST00000549509 470 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 GNRHR2P1-201ENST00000555315 631 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 MED28P6-201ENST00000558776 231 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 AC005730.3-201ENST00000583067 366 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 AC091135.1-201ENST00000585943 307 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 AP001029.3-201ENST00000588063 596 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 AC067852.3-201ENST00000589177 561 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 SRGNP1-201ENST00000603392 451 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 RNU1-30P-201ENST00000606575 163 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 U3.45-201ENST00000607547 219 ntBASIC4.3□□□□□ -1.72
VTA1Q9NP79 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
VTA1Q9NP79 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VTA1Q9NP79 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 TPTE2P4-201ENST00000258589 1605 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 RN7SKP44-201ENST00000363602 316 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 Y_RNA.576-201ENST00000384781 102 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 AL606923.1-201ENST00000406616 190 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 RN7SKP140-201ENST00000411196 284 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC079780.1-201ENST00000428259 207 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 AL121601.2-201ENST00000438019 707 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC104806.1-201ENST00000508720 308 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC010486.1-201ENST00000511793 424 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 SCARNA15.2-201ENST00000516409 127 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 RN7SKP60-201ENST00000516985 239 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 SUB1P1-201ENST00000524415 382 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 OR5B19P-201ENST00000531766 928 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 BNIP3P9-201ENST00000603714 553 ntBASIC4.29□□□□□ -1.72
VTA1Q9NP79 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.29□□□□□ -1.72
VTA1Q9NP79 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
VTA1Q9NP79 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VTA1Q9NP79 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VTA1Q9NP79 AC008725.1-201ENST00000605123 2263 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms