Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC024082.2-201ENST00000434771 238 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 FAM103A2P-201ENST00000444122 354 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC072039.1-201ENST00000477611 581 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC010486.2-201ENST00000505572 483 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC005178.1-201ENST00000508392 440 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC109464.2-201ENST00000510242 943 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 MTND1P22-201ENST00000510572 951 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 RNA5SP24-201ENST00000516478 95 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC109329.2-201ENST00000519658 482 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC013828.2-201ENST00000532487 235 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC068587.4-201ENST00000533893 186 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 MTND3P12-201ENST00000559068 328 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 MIR4307-201ENST00000582802 84 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 SNORD84-203ENST00000584275 78 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AL158211.4-201ENST00000606988 584 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC103710.4-201ENST00000609301 899 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC068831.7-201ENST00000616954 363 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC012150.2-201ENST00000621300 544 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC025034.2-201ENST00000623264 286 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC095031.1-201ENST00000623685 672 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 AC090617.7-201ENST00000623952 126 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 MIR1291-201ENST00000627649 87 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF41Q9H4P4 CCT4P2-201ENST00000233836 1548 ntBASIC2.87□□□□□ -1.95
RNF41Q9H4P4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC009902.3-201ENST00000606235 2172 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 Y_RNA.97-201ENST00000363094 102 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 RNU5E-8P-201ENST00000363502 116 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 RNU6-853P-201ENST00000364306 107 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 RNU1-101P-201ENST00000391171 127 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC009963.1-201ENST00000417265 157 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 PPP1R11P2-201ENST00000423543 382 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 MTND4P20-201ENST00000424125 869 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 MTND1P26-201ENST00000440488 538 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC106872.3-201ENST00000495104 446 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 MTND5P4-201ENST00000514978 288 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 RNU6-232P-201ENST00000517144 64 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC125611.2-201ENST00000551907 647 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AP001004.1-201ENST00000582468 324 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC010620.2-201ENST00000600135 313 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC106028.5-201ENST00000610332 395 ntBASIC2.86□□□□□ -1.95
RNF41Q9H4P4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
RNF41Q9H4P4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 RNU6-553P-201ENST00000364047 96 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 RNU6-76P-201ENST00000384060 104 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 SNORA36C-201ENST00000384289 132 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 SNORA67.4-201ENST00000384688 142 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 HMGB1P11-201ENST00000413899 637 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 CCDC58P2-201ENST00000417131 366 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 USP9YP26-201ENST00000421008 661 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AL365203.2-201ENST00000423444 196 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 MTND1P9-201ENST00000453775 944 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 RPS23P3-201ENST00000470993 430 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 RPL30P6-201ENST00000475925 342 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC034222.1-201ENST00000494052 532 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC234781.5-201ENST00000508429 271 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 SNORA70.16-201ENST00000516390 95 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 RNU6-759P-201ENST00000516740 103 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 RNU6-826P-201ENST00000516827 104 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF41Q9H4P4 AC090888.1-201ENST00000561335 1141 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 BNIP3P23-201ENST00000599655 511 ntBASIC2.85□□□□□ -1.95
RNF41Q9H4P4 WISP1-OT1-201ENST00000602893 642 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms