Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 OR2AS1P-201ENST00000427827 319 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 OR2B8P-201ENST00000432841 938 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 DDX3P2-201ENST00000446138 111 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC020550.1-201ENST00000447385 163 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 SNRPGP9-201ENST00000456025 225 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC146507.2-201ENST00000460608 476 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 RN7SL863P-201ENST00000462370 296 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 RAC1P5-201ENST00000512182 576 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 SNORA31.21-201ENST00000517180 77 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 TRAV28-201ENST00000557548 323 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AMZ2P1-203ENST00000565833 850 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 CLIC4P2-201ENST00000601934 717 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AL590229.1-201ENST00000603497 542 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC068276.1-201ENST00000605793 379 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC239868.4-201ENST00000608318 671 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC004832.5-201ENST00000608677 401 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC138749.5-201ENST00000611461 208 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC073114.1-201ENST00000612027 490 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 uc_338.12-201ENST00000616344 181 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC116165.2-201ENST00000616705 206 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC091953.5-201ENST00000622919 233 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC026422.1-201ENST00000623961 452 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 AC092435.3-201ENST00000565538 3654 ntBASIC2.91□□□□□ -1.94
UBQLN3Q9H347 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.91□□□□□ -1.94
UBQLN3Q9H347 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.9□□□□□ -1.94
UBQLN3Q9H347 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.9□□□□□ -1.94
UBQLN3Q9H347 AC008264.2-201ENST00000610193 3731 ntBASIC2.9□□□□□ -1.94
UBQLN3Q9H347 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
UBQLN3Q9H347 U3.4-201ENST00000363352 213 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 RNU6-1284P-201ENST00000363701 100 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 SNORA7.4-201ENST00000384249 137 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 RNY3P10-201ENST00000384764 102 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC019097.1-201ENST00000424783 735 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC119618.1-201ENST00000434191 222 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC129850.1-201ENST00000436203 508 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 Z82210.1-201ENST00000440037 231 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 RPS20P22-201ENST00000473700 357 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC006445.1-201ENST00000491925 405 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC034105.3-201ENST00000565294 442 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 HMGN1P30-201ENST00000589286 268 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 BNIP3P8-201ENST00000597863 560 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 uc_338.25-201ENST00000613756 156 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC004852.3-201ENST00000614131 326 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 AC092140.2-201ENST00000618027 521 ntBASIC2.9□□□□□ -1.95
UBQLN3Q9H347 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
UBQLN3Q9H347 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
UBQLN3Q9H347 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
UBQLN3Q9H347 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
UBQLN3Q9H347 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
UBQLN3Q9H347 GABRG2-229ENST00000641017 3628 ntBASIC2.89□□□□□ -1.95
UBQLN3Q9H347 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
UBQLN3Q9H347 RNU6-701P-201ENST00000384059 107 ntBASIC2.89□□□□□ -1.95
UBQLN3Q9H347 NDUFS5P1-201ENST00000405668 289 ntBASIC2.89□□□□□ -1.95
UBQLN3Q9H347 MIR1289-1-201ENST00000408836 144 ntBASIC2.89□□□□□ -1.95
UBQLN3Q9H347 RNU2-33P-201ENST00000410344 192 ntBASIC2.89□□□□□ -1.95
UBQLN3Q9H347 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.89□□□□□ -1.95
UBQLN3Q9H347 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.89□□□□□ -1.95
UBQLN3Q9H347 RPL23AP58-201ENST00000440453 469 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms