Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 MTATP6P29-201ENST00000415057 132 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC119751.6-201ENST00000416712 186 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS11Q9H270 RPS15AP12-201ENST00000419498 388 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS11Q9H270 AL132765.1-201ENST00000434165 553 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 RPL23AP89-201ENST00000439324 255 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 H2AFZP6-201ENST00000444403 394 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS11Q9H270 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS11Q9H270 AL162591.2-201ENST00000449634 317 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC092324.1-201ENST00000468671 324 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 RPL21P126-201ENST00000470049 478 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS11Q9H270 RPL23AP41-201ENST00000484754 458 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC104164.2-201ENST00000496953 495 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS11Q9H270 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS11Q9H270 RN7SKP24-201ENST00000515888 284 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 RNU6-566P-201ENST00000516790 107 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 RNU6-1073P-201ENST00000517182 106 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC087854.1-201ENST00000519706 414 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC079587.1-201ENST00000603846 277 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AL022099.1-201ENST00000604551 712 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AL592436.1-201ENST00000605135 558 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS11Q9H270 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS11Q9H270 AL021997.2-201ENST00000615674 271 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC137590.2-201ENST00000619709 240 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC098657.3-201ENST00000620434 263 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AL360181.4-201ENST00000621752 134 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS11Q9H270 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS11Q9H270 AC139713.2-214ENST00000642059 1811 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS11Q9H270 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS11Q9H270 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS11Q9H270 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS11Q9H270 CDC27P3-201ENST00000635418 1910 ntBASIC4.29□□□□□ -1.72
VPS11Q9H270 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS11Q9H270 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AC116096.1-201ENST00000566804 2314 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS11Q9H270 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS11Q9H270 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS11Q9H270 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS11Q9H270 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VPS11Q9H270 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS11Q9H270 Y_RNA.22-201ENST00000362492 102 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 RNU6-238P-201ENST00000363313 106 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 SNORD113.2-201ENST00000364166 89 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 RNY1P12-201ENST00000364251 105 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 RNA5SP175-201ENST00000364275 119 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 Y_RNA.364-201ENST00000365532 101 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 RNU6-1040P-201ENST00000383974 107 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 RNY1P14-201ENST00000384426 108 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 Y_RNA.512-201ENST00000384518 102 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 RNU6-882P-201ENST00000391025 103 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 RNU2-43P-201ENST00000410306 190 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 AL139095.3-201ENST00000419672 1203 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS11Q9H270 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS11Q9H270 RPL7P43-201ENST00000478876 753 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 AC083982.1-201ENST00000485679 344 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 TRBVA-201ENST00000498804 316 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AC092436.1-201ENST00000506450 503 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS11Q9H270 RNU6-1038P-201ENST00000516516 104 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 AP000827.1-201ENST00000527814 258 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 MTCO3P23-201ENST00000561363 289 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AL360157.1-201ENST00000565962 87 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 AC113195.1-201ENST00000579952 141 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AP005019.3-201ENST00000620418 560 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS11Q9H270 AL049641.1-201ENST00000441055 1948 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS11Q9H270 AC010300.1-201ENST00000600671 5134 ntBASIC4.28□□□□□ -1.72
VPS11Q9H270 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
VPS11Q9H270 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS11Q9H270 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VPS11Q9H270 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS11Q9H270 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS11Q9H270 RNU6-1013P-201ENST00000384180 107 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 RNU6-39P-201ENST00000384344 107 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 Y_RNA.645-201ENST00000391229 102 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 RNU6-903P-201ENST00000391270 109 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 AL139397.2-201ENST00000404529 772 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 SNORA3C-201ENST00000408792 125 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 RNU2-36P-201ENST00000410361 191 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 Y_RNA.646-201ENST00000410980 101 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 RNU6-954P-201ENST00000411355 107 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.27□□□□□ -1.73
VPS11Q9H270 OR4K11P-201ENST00000431829 904 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms