Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RPL23AP38-201ENST00000423801 469 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RPL23AP25-201ENST00000430973 463 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 OR4C10P-201ENST00000434991 931 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 HMGN2P21-201ENST00000447764 270 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RPL36AP13-201ENST00000457490 317 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 HMGB3P30-201ENST00000457863 606 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RPL23AP55-201ENST00000498163 452 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC097473.1-201ENST00000508142 408 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 Vault.1-201ENST00000516474 102 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RNU6-635P-201ENST00000516651 102 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RNU6-1016P-201ENST00000516689 94 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 RNU6-1092P-201ENST00000516955 87 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AP004371.1-201ENST00000525240 214 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC005255.1-201ENST00000593748 216 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 SNRPGP15-201ENST00000600149 222 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC010201.1-201ENST00000605051 540 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC009229.3-201ENST00000608056 282 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 PISRT1.1-201ENST00000616930 107 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC103705.1-201ENST00000619013 241 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AC098657.3-201ENST00000620434 263 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AL161637.1-201ENST00000622380 412 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 AL445363.3-201ENST00000623080 671 ntBASIC4.51□□□□□ -1.69
RNF38Q9H0F5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF38Q9H0F5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNU6-562P-201ENST00000362731 107 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNU6-1155P-201ENST00000363554 107 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNA5SP175-201ENST00000364275 119 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNU6-335P-201ENST00000364563 113 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 SET-203ENST00000372688 801 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.476-201ENST00000384347 108 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNU6-1127P-201ENST00000384580 107 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RPS26P8-201ENST00000393490 348 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AL360182.1-201ENST00000397433 468 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AL391417.1-201ENST00000404100 426 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNA5SP36-201ENST00000410197 133 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RPL36AP6-201ENST00000435770 321 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 USP9YP7-201ENST00000436723 430 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 USP9YP32-201ENST00000452432 430 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 GSTA11P-201ENST00000452866 669 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 DYNLL1P5-201ENST00000467158 270 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AC079140.5-201ENST00000507882 310 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNA5SP519-201ENST00000516480 119 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RANP3-201ENST00000530970 276 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 TVP23BP1-201ENST00000557500 617 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RN7SL600P-201ENST00000581811 299 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AC008162.1-201ENST00000604718 254 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AL670379.4-201ENST00000605279 254 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AC015813.4-201ENST00000610469 179 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AC023043.4-201ENST00000612081 449 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 FAM157A-202ENST00000615155 405 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 AL589994.2-201ENST00000621124 579 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 RNA5SP196-201ENST00000625967 102 ntBASIC4.5□□□□□ -1.69
RNF38Q9H0F5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF38Q9H0F5 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 RNU1-14P-201ENST00000362759 152 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.404-201ENST00000383978 102 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 RNU6-629P-201ENST00000384061 103 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 SNORD3H-201ENST00000384486 214 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MT-TG-201ENST00000387429 68 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AL590632.1-201ENST00000424289 371 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 S100A11P1-201ENST00000477525 312 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms