Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AL158827.2-201ENST00000602494 330 ntBASIC3.37□□□□□ -1.87
ZNF541Q9H0D2 AL359999.1-201ENST00000604513 294 ntBASIC3.37□□□□□ -1.87
ZNF541Q9H0D2 AL691447.3-201ENST00000635020 330 ntBASIC3.37□□□□□ -1.87
ZNF541Q9H0D2 MIR7153-201ENST00000637758 57 ntBASIC3.37□□□□□ -1.87
ZNF541Q9H0D2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.37□□□□□ -1.87
ZNF541Q9H0D2 MTND4P4-201ENST00000439033 1366 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC009812.4-201ENST00000569134 1805 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 Y_RNA.46-201ENST00000362695 102 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 U3.4-201ENST00000363352 213 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 MIR764-201ENST00000390811 85 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 RNU6-754P-201ENST00000391166 107 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC008850.1-201ENST00000427546 362 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 NEK4P1-201ENST00000433383 879 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC006539.3-201ENST00000454258 129 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 HMGN2P16-201ENST00000456802 261 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC109486.1-201ENST00000486833 374 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC105914.1-201ENST00000511798 226 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 RNU6-1003P-201ENST00000517099 105 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 ERHP1-201ENST00000523006 310 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AP002770.2-201ENST00000543613 532 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC097065.2-201ENST00000608159 533 ntBASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF541Q9H0D2 AC004972.1-201ENST00000623934 2209 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RNA5SP289-201ENST00000362332 137 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RNU5E-8P-201ENST00000363502 116 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RPS4XP7-201ENST00000406274 780 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 TXNP7-201ENST00000406296 293 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 Y_RNA.598-201ENST00000410480 95 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RPL31P12-201ENST00000422587 358 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AL356583.2-201ENST00000426536 280 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 MTATP6P4-201ENST00000427725 675 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 SRIP2-201ENST00000428470 166 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 KATNBL1P3-201ENST00000443475 909 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 COX6CP2-201ENST00000444980 225 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 MTND2P4-201ENST00000445034 1004 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 ELOCP30-201ENST00000447108 299 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RNU7-59P-201ENST00000459101 61 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AL049714.1-201ENST00000466686 347 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AL049874.1-201ENST00000489560 388 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC055855.1-201ENST00000489563 579 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AP000857.1-201ENST00000532151 543 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 OR4T1P-201ENST00000554933 911 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 RPL23AP84-201ENST00000571193 464 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 MIR5697-201ENST00000578045 78 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 UBE2L4-201ENST00000587688 464 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC239868.4-201ENST00000608318 671 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AC093838.1-201ENST00000613014 469 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 Z69908.1-201ENST00000622603 247 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 AL158801.5-201ENST00000623123 465 ntBASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF541Q9H0D2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 SNORA23-201ENST00000365128 182 ntBASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 EI24P2-201ENST00000397776 1076 ntBASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 AC078974.1-201ENST00000411597 223 ntBASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 AC006366.1-201ENST00000422002 759 ntBASIC3.34□□□□□ -1.87
ZNF541Q9H0D2 CYCSP46-201ENST00000423569 204 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms