Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SNORD13-201ENST00000459299 104 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC011352.3-201ENST00000505162 593 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 COL6A4P2-205ENST00000509855 506 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 RNA5SP490-201ENST00000517141 136 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 HMGN1P28-201ENST00000521340 364 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM4Q9C037 RPP40P2-201ENST00000603596 712 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AC004908.2-201ENST00000609090 574 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AP003399.1-201ENST00000637534 361 ntBASIC1.95□□□□□ -2.1
TRIM4Q9C037 AL390862.1-201ENST00000635467 1469 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 SNORD115-48-201ENST00000364764 76 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 RNU6-234P-201ENST00000365229 104 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AL121978.1-201ENST00000402778 359 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AL589655.1-201ENST00000405398 482 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 RPS3AP24-201ENST00000407896 734 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC093422.3-201ENST00000428506 305 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AL929288.2-201ENST00000446368 407 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 CABYRP1-201ENST00000465493 1045 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC105252.1-201ENST00000503089 286 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 RNU7-193P-201ENST00000516723 65 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC025918.2-201ENST00000558683 763 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC022662.1-201ENST00000580252 331 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 GAS5-AS1-201ENST00000602767 694 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AL109918.3-201ENST00000603072 338 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC103710.1-201ENST00000610003 901 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC096586.1-201ENST00000610267 561 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.15-201ENST00000611544 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.16-201ENST00000613119 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.12-201ENST00000613778 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.20-201ENST00000613956 192 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.9-201ENST00000615427 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.11-201ENST00000616345 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.2-201ENST00000616535 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.3-201ENST00000617785 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 AL449363.1-201ENST00000617815 186 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.19-201ENST00000618602 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 RNU2-1-201ENST00000618664 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.6-201ENST00000619225 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.5-201ENST00000619465 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 U2.10-201ENST00000620268 191 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 MTND4P27-201ENST00000450813 1354 ntBASIC1.94□□□□□ -2.1
TRIM4Q9C037 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM4Q9C037 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
TRIM4Q9C037 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM4Q9C037 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRIM4Q9C037 CCT4P2-201ENST00000233836 1548 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 MIR325-201ENST00000385260 98 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM4Q9C037 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.93□□□□□ -2.1
TRIM4Q9C037 CBWD4P-201ENST00000445695 655 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 TPT1P14-201ENST00000448018 505 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 TRGVB-201ENST00000453257 471 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AC055855.1-201ENST00000489563 579 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.93□□□□□ -2.1
TRIM4Q9C037 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.93□□□□□ -2.1
TRIM4Q9C037 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.93□□□□□ -2.1
TRIM4Q9C037 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM4Q9C037 BX248123.2-201ENST00000606318 124 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AL355802.4-201ENST00000607635 548 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AL592148.2-201ENST00000612210 372 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AL161423.1-201ENST00000613700 262 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AC090132.2-201ENST00000615881 347 ntBASIC1.93□□□□□ -2.1
TRIM4Q9C037 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM4Q9C037 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 RNU6-582P-201ENST00000362989 107 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 MIR135A2-201ENST00000384854 100 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AC019129.1-201ENST00000403786 261 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 MIR1290-201ENST00000408735 78 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 RNU2-15P-201ENST00000410692 191 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 MTND4P24-201ENST00000424002 397 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 USP12PX-201ENST00000432383 1057 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 TAAR7P-201ENST00000436141 242 ntBASIC1.92□□□□□ -2.1
TRIM4Q9C037 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.92□□□□□ -2.1
TRIM4Q9C037 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms