Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC068769.1-201ENST00000474767 2426 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AP000432.2-201ENST00000624164 2048 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.23-201ENST00000362496 106 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RNU6-1301P-201ENST00000362724 104 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RNU1-130P-201ENST00000363930 160 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 U3.10-201ENST00000364459 214 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.324-201ENST00000365165 102 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RN7SKP186-201ENST00000365371 303 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RNU6-429P-201ENST00000384582 108 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 MIR578-201ENST00000384828 96 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RNA5SP397-201ENST00000391323 118 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AL022722.2-201ENST00000402519 180 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RPL23AP26-201ENST00000412728 464 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AC010655.1-201ENST00000449336 292 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RPS4XP22-201ENST00000480755 780 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AL160314.1-201ENST00000490836 438 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AC005912.1-201ENST00000495392 255 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 RN7SL356P-201ENST00000582228 248 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AC067852.4-201ENST00000590314 478 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AL355816.1-201ENST00000607951 118 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AC039056.2-201ENST00000622261 511 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 MIR492-201ENST00000638676 116 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 AL137141.1-201ENST00000624622 4836 ntBASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
COL25A1Q9BXS0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
COL25A1Q9BXS0 Y_RNA.357-201ENST00000365487 109 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 RNA5SP283-201ENST00000365604 119 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 MIR539-201ENST00000365690 78 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 U3.29-201ENST00000391296 212 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 RNF10P1-201ENST00000418589 369 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AL451136.1-201ENST00000435399 325 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC234775.1-201ENST00000454247 670 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 RNU6-1211P-201ENST00000459179 105 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 PPIAP15-201ENST00000479662 484 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC105137.1-201ENST00000484355 562 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC127455.1-201ENST00000565496 145 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 RN7SL652P-201ENST00000577769 300 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AL133393.1-201ENST00000603277 287 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 MIR15A-201ENST00000607334 83 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AL591926.4-201ENST00000616895 298 ntBASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
COL25A1Q9BXS0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AL034549.2-201ENST00000618285 3373 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AP005432.1-201ENST00000580891 3485 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 RNU6-653P-201ENST00000363074 106 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 RNU6-755P-201ENST00000364400 103 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 Y_RNA.563-201ENST00000384707 108 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 RNU11-4P-201ENST00000391149 133 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 RNU6ATAC-201ENST00000408749 126 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 AL512844.2-201ENST00000433990 593 ntBASIC5.14□□□□□ -1.59
COL25A1Q9BXS0 SEPT7P4-201ENST00000437076 306 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms