Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.57□□□□□ -2
NDUFAF3Q9BU61 AC122133.1-201ENST00000613964 233 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.57□□□□□ -2
NDUFAF3Q9BU61 AC104010.1-201ENST00000616889 150 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 AC099506.2-201ENST00000623074 221 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 FRG1KP-201ENST00000623592 341 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 AP000770.2-201ENST00000623694 100 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 AC091953.2-201ENST00000623979 160 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NDUFAF3Q9BU61 AL359693.1-201ENST00000614959 2407 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 CR848007.1-201ENST00000442354 1699 ntBASIC2.57□□□□□ -2
NDUFAF3Q9BU61 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RNU1-70P-201ENST00000362618 164 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RNA5SP387-201ENST00000364226 106 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 SNORA70.4-201ENST00000365509 134 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RNU5A-2P-201ENST00000384337 116 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL021407.1-201ENST00000404531 386 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 FCF1P10-201ENST00000407590 479 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RNU2-49P-201ENST00000410666 184 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RNA5SP492-201ENST00000411330 114 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC023141.4-201ENST00000412031 328 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 SYF2P2-201ENST00000417620 583 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RPS15AP12-201ENST00000419498 388 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC019097.1-201ENST00000424783 735 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RPL36AP53-201ENST00000432891 316 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RPL23AP83-201ENST00000434984 473 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC093156.1-201ENST00000440382 670 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 MTND4P25-201ENST00000441039 533 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 UBBP3-201ENST00000445497 241 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RPL21P23-201ENST00000446654 460 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL133217.1-201ENST00000450980 425 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 SNORD97-201ENST00000459187 142 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC008571.1-201ENST00000467232 300 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RPL27AP5-201ENST00000469428 449 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RPS27AP9-201ENST00000477681 438 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AP000797.1-201ENST00000478870 387 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RN7SL293P-201ENST00000481765 281 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC105252.1-201ENST00000503089 286 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 MTND1P22-201ENST00000510572 951 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 MRPS36P2-201ENST00000512569 299 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RNU6-759P-201ENST00000516740 103 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RNU6-826P-201ENST00000516827 104 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 OR5B10P-201ENST00000532869 642 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC026333.2-201ENST00000542164 106 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 RPS3AP4-201ENST00000555161 764 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC023043.3-201ENST00000593113 385 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 WISP1-OT1-201ENST00000602893 642 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL359999.1-201ENST00000604513 294 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 Z99289.3-201ENST00000605586 594 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC007619.2-201ENST00000605743 379 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC013562.2-201ENST00000611632 603 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AL589994.2-201ENST00000621124 579 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AF246928.1-201ENST00000623768 87 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 AC079416.3-201ENST00000624479 549 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 MTND5P1-201ENST00000445440 1375 ntBASIC2.56□□□□□ -2
NDUFAF3Q9BU61 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.56□□□□□ -2
NDUFAF3Q9BU61 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 RNU6-553P-201ENST00000364047 96 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 Y_RNA.333-201ENST00000365274 102 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 RNU5E-5P-201ENST00000365379 116 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 RNU1-73P-201ENST00000383971 164 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 AL139095.1-201ENST00000404326 391 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 SNORD88.1-201ENST00000408684 91 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 RNU2-36P-201ENST00000410361 191 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 Y_RNA.608-201ENST00000410647 95 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 NDUFS5P4-201ENST00000412983 318 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 AL096701.2-201ENST00000416920 238 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 Z99497.1-201ENST00000421282 135 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 BPY2DP-201ENST00000422208 265 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 SKA2P1-201ENST00000425592 390 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 ISCA1P1-201ENST00000426679 387 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 AC005300.1-201ENST00000428401 373 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 AC092641.1-201ENST00000440229 772 ntBASIC2.55□□□□□ -2
NDUFAF3Q9BU61 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.55□□□□□ -2
NDUFAF3Q9BU61 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms