Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 HSPE1P8-201ENST00000406997 288 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AL158071.1-201ENST00000430315 461 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AL031274.1-201ENST00000450334 232 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AP000942.1-201ENST00000463969 747 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 RN7SL860P-201ENST00000473738 223 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AP000889.1-201ENST00000530968 660 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 OR5D17P-201ENST00000531492 978 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 MIR4436B2-201ENST00000581415 91 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 MIR4436B1-201ENST00000583272 91 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 MTND4LP5-201ENST00000605152 292 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AL365434.2-201ENST00000607979 234 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AC103858.2-201ENST00000621471 543 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 AP001273.1-201ENST00000624493 3152 ntBASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM56Q9BRZ2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC233263.6-201ENST00000631132 1963 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 OR56A5-201ENST00000340110 738 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 DEFB108F-201ENST00000344638 222 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RNU6-1156P-201ENST00000410365 100 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RNU6-174P-201ENST00000410406 106 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RNU2-64P-201ENST00000411315 191 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC244098.2-201ENST00000422068 99 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 BX276092.3-201ENST00000424182 230 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 HMGB1P9-201ENST00000429856 646 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL359073.1-201ENST00000448036 403 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 MTCO3P8-201ENST00000453691 755 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RN7SL244P-201ENST00000493405 297 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC083829.1-201ENST00000503756 657 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 ACA59.1-201ENST00000515966 143 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RNU6-709P-201ENST00000517257 104 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC087369.1-201ENST00000520775 996 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 HIGD1AP5-201ENST00000529959 259 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC092490.3-201ENST00000545370 572 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RPL23AP87-202ENST00000573039 466 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RN7SL652P-201ENST00000577769 300 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 MIR5188-201ENST00000583467 113 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 MIR548AC-201ENST00000585049 88 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 OR1M4P-201ENST00000589199 287 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 HMGB2P1-201ENST00000591146 634 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 RNF138P2-201ENST00000603490 592 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL160281.1-201ENST00000605307 311 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL161616.1-201ENST00000611867 286 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL031601.2-202ENST00000622650 282 ntBASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM56Q9BRZ2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 RNU5A-1-201ENST00000362698 116 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 RNU4-42P-201ENST00000364738 142 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 Y_RNA.515-201ENST00000384535 112 ntBASIC4.88□□□□□ -1.63
TRIM56Q9BRZ2 AL445529.1-201ENST00000398713 389 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms