Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.03□□□□□ -1.92
CPNE1Q99829 UBL5P2-201ENST00000583788 219 ntBASIC3.03□□□□□ -1.92
CPNE1Q99829 PIGPP4-201ENST00000584447 307 ntBASIC3.03□□□□□ -1.92
CPNE1Q99829 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.03□□□□□ -1.92
CPNE1Q99829 DPPA3P3-201ENST00000603842 430 ntBASIC3.03□□□□□ -1.92
CPNE1Q99829 AL451064.1-201ENST00000607718 471 ntBASIC3.03□□□□□ -1.92
CPNE1Q99829 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.03□□□□□ -1.92
CPNE1Q99829 AC091304.9-201ENST00000612091 226 ntBASIC3.03□□□□□ -1.92
CPNE1Q99829 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.03□□□□□ -1.92
CPNE1Q99829 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CPNE1Q99829 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CPNE1Q99829 AC110774.1-201ENST00000623567 2018 ntBASIC3.03□□□□□ -1.92
CPNE1Q99829 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CPNE1Q99829 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
CPNE1Q99829 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC233263.6-201ENST00000631132 1963 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CPNE1Q99829 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CPNE1Q99829 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CPNE1Q99829 RNU5E-1-201ENST00000362477 120 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 SNORA14A-201ENST00000364773 135 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 SNORA62.3-201ENST00000365110 153 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CPNE1Q99829 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CPNE1Q99829 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CPNE1Q99829 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.02□□□□□ -1.93
CPNE1Q99829 SDCBPP3-201ENST00000419629 891 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.02□□□□□ -1.93
CPNE1Q99829 USP9YP15-201ENST00000442391 422 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC091153.1-201ENST00000466297 402 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC093534.1-201ENST00000504977 132 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.02□□□□□ -1.93
CPNE1Q99829 SAP18P1-201ENST00000512058 390 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 AC117532.1-201ENST00000514638 323 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 RNU2-46P-201ENST00000517038 113 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 AP000867.2-201ENST00000532468 320 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.02□□□□□ -1.93
CPNE1Q99829 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC073544.2-201ENST00000601155 540 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 DUXAP4-201ENST00000603046 613 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 SEPT7P9-203ENST00000604116 343 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 AC135507.1-201ENST00000607214 561 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.02□□□□□ -1.93
CPNE1Q99829 MTCO1P12-201ENST00000414273 1543 ntBASIC3.02□□□□□ -1.93
CPNE1Q99829 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CPNE1Q99829 AC093908.1-201ENST00000623125 8092 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
CPNE1Q99829 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.01□□□□□ -1.93
CPNE1Q99829 RNY4P34-201ENST00000364779 95 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 RNU6-701P-201ENST00000384059 107 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 MIR134-201ENST00000385258 73 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 RNA5SP252-201ENST00000391131 119 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 RNU1-101P-201ENST00000391171 127 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 RNU2-36P-201ENST00000410361 191 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.01□□□□□ -1.93
CPNE1Q99829 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.01□□□□□ -1.93
CPNE1Q99829 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CPNE1Q99829 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.01□□□□□ -1.93
CPNE1Q99829 HMGB1P27-201ENST00000431429 603 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.01□□□□□ -1.93
CPNE1Q99829 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.01□□□□□ -1.93
CPNE1Q99829 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.01□□□□□ -1.93
CPNE1Q99829 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 RPL37P6-201ENST00000460682 294 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.01□□□□□ -1.93
CPNE1Q99829 AC002456.2-201ENST00000509356 380 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 NDUFB4P2-201ENST00000509515 391 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 SNORA31.3-201ENST00000516029 96 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 RNU6-928P-201ENST00000516876 104 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.01□□□□□ -1.93
CPNE1Q99829 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.01□□□□□ -1.93
CPNE1Q99829 AC034105.4-201ENST00000568304 277 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 AC005951.1-201ENST00000576706 485 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.01□□□□□ -1.93
CPNE1Q99829 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.01□□□□□ -1.93
CPNE1Q99829 AC087752.4-201ENST00000605911 462 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 AC034102.8-201ENST00000615146 484 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 AC034229.5-201ENST00000624258 185 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 U6.105-201ENST00000637379 88 ntBASIC3.01□□□□□ -1.93
CPNE1Q99829 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CPNE1Q99829 AL137003.2-201ENST00000606924 2538 ntBASIC3□□□□□ -1.93
CPNE1Q99829 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3□□□□□ -1.93
CPNE1Q99829 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
CPNE1Q99829 FARSBP1-201ENST00000435808 1778 ntBASIC3□□□□□ -1.93
CPNE1Q99829 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CPNE1Q99829 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CPNE1Q99829 HSPE1P11-201ENST00000339579 310 ntBASIC3□□□□□ -1.93
CPNE1Q99829 U8.3-201ENST00000363321 132 ntBASIC3□□□□□ -1.93
CPNE1Q99829 RNU5E-6P-201ENST00000365574 115 ntBASIC3□□□□□ -1.93
CPNE1Q99829 RNU6-217P-201ENST00000384164 104 ntBASIC3□□□□□ -1.93
CPNE1Q99829 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
CPNE1Q99829 NDUFB4P5-201ENST00000415445 361 ntBASIC3□□□□□ -1.93
CPNE1Q99829 ELOCP4-201ENST00000420090 333 ntBASIC3□□□□□ -1.93
CPNE1Q99829 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms