Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AP000857.1-201ENST00000532151 543 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.06□□□□□ -1.92
CDCA3Q99618 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDCA3Q99618 AL133153.1-201ENST00000557756 303 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC005951.1-201ENST00000576706 485 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.06□□□□□ -1.92
CDCA3Q99618 AC105224.1-201ENST00000587055 421 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AP002826.1-201ENST00000608835 315 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC004908.2-201ENST00000609090 574 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC009878.1-201ENST00000621819 340 ntBASIC3.06□□□□□ -1.92
CDCA3Q99618 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.06□□□□□ -1.92
CDCA3Q99618 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.06□□□□□ -1.92
CDCA3Q99618 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDCA3Q99618 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDCA3Q99618 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.06□□□□□ -1.92
CDCA3Q99618 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.05□□□□□ -1.92
CDCA3Q99618 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CDCA3Q99618 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDCA3Q99618 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDCA3Q99618 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.05□□□□□ -1.92
CDCA3Q99618 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.05□□□□□ -1.92
CDCA3Q99618 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDCA3Q99618 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDCA3Q99618 RNA5SP432-201ENST00000362480 116 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 RNU5A-1-201ENST00000362698 116 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 SNORA23-201ENST00000365128 182 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.05□□□□□ -1.92
CDCA3Q99618 DYNLT3P1-201ENST00000378574 347 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 RNU6-278P-201ENST00000390945 109 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 SNORD115.1-201ENST00000391109 76 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 FCF1P10-201ENST00000407590 479 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 MIR1261-201ENST00000408659 82 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 Y_RNA.598-201ENST00000410480 95 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 RNA5SP274-201ENST00000410484 108 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 NDUFB4P5-201ENST00000415445 361 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 SEPT2P1-201ENST00000419651 180 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AL353777.1-201ENST00000425552 326 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.05□□□□□ -1.92
CDCA3Q99618 MTND1P28-201ENST00000435623 950 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 HMGN2P20-201ENST00000437531 273 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.05□□□□□ -1.92
CDCA3Q99618 NIPA2P5-201ENST00000452282 464 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 RPL31P3-201ENST00000458430 332 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 RN7SL20P-201ENST00000488827 297 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.05□□□□□ -1.92
CDCA3Q99618 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC006445.2-201ENST00000510061 472 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 SNORA70.16-201ENST00000516390 95 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 Y_RNA.695-201ENST00000516715 107 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC022616.6-201ENST00000520479 119 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 ERHP1-201ENST00000523006 310 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC079600.2-201ENST00000550076 130 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC091544.4-201ENST00000555268 342 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC119751.7-201ENST00000600494 245 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC112191.3-201ENST00000604371 277 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC135507.1-201ENST00000607214 561 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC107294.3-201ENST00000609211 526 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 TUG1_2.1-201ENST00000614234 87 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CDCA3Q99618 AC007318.2-201ENST00000620999 243 ntBASIC3.05□□□□□ -1.92
CDCA3Q99618 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CDCA3Q99618 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDCA3Q99618 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.05□□□□□ -1.92
CDCA3Q99618 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDCA3Q99618 FAM35CP-201ENST00000554755 2470 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDCA3Q99618 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CDCA3Q99618 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDCA3Q99618 RNU6-859P-201ENST00000362728 107 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RNU6-223P-201ENST00000362830 107 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 Y_RNA.77-201ENST00000362962 107 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDCA3Q99618 RN7SKP142-201ENST00000411236 328 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RPS7P13-201ENST00000413955 498 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RPL32P35-201ENST00000415214 394 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AL365338.1-201ENST00000422282 858 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC018630.2-202ENST00000422992 927 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 UBE2D3P2-201ENST00000424409 445 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.04□□□□□ -1.92
CDCA3Q99618 MTCO2P16-201ENST00000436962 677 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC009969.1-201ENST00000438726 172 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.04□□□□□ -1.92
CDCA3Q99618 RPL17P49-201ENST00000443728 411 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 TAF9P1-201ENST00000445421 515 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 ELOCP30-201ENST00000447108 299 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AL162389.1-201ENST00000449233 177 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms