Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNA5SP213-201ENST00000391031 106 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 U3.37-201ENST00000408528 213 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 AC009237.10-201ENST00000414112 510 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 AC140479.3-201ENST00000418944 1126 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 AL031659.1-201ENST00000447075 539 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 AC004129.2-201ENST00000457229 287 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 RN7SL41P-201ENST00000476144 297 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 AP001025.1-201ENST00000486139 332 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 AP004607.1-201ENST00000524456 203 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 TXNP4-201ENST00000575018 310 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 MIR4782-201ENST00000577987 79 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 AC008749.1-201ENST00000597650 306 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 AL590392.1-201ENST00000604960 446 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 RNA5SP439-201ENST00000617595 124 ntBASIC5.7□□□□□ -1.5
PHOX2BQ99453 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.7□□□□□ -1.5
PHOX2BQ99453 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PHOX2BQ99453 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 RAD17P1-201ENST00000418130 2042 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 Y_RNA.81-201ENST00000362997 102 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 RNU6-626P-201ENST00000363354 107 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 RNU6-417P-201ENST00000384712 107 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 Y_RNA.580-201ENST00000391004 95 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 RNU6-1135P-201ENST00000411083 103 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 REREP1Y-201ENST00000422655 198 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 POLR2KP2-201ENST00000438155 177 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 REREP2Y-201ENST00000439103 200 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 SNORA31.20-201ENST00000517111 133 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC107016.1-201ENST00000550463 337 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 MIR4260-201ENST00000583107 67 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC053481.4-201ENST00000583164 216 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 AL139099.4-201ENST00000614802 114 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 AC006001.4-201ENST00000622243 395 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 OR4F13P-202ENST00000560066 2054 ntBASIC5.69□□□□□ -1.5
PHOX2BQ99453 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PHOX2BQ99453 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHOX2BQ99453 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHOX2BQ99453 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHOX2BQ99453 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 RNU5F-3P-201ENST00000363767 117 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 Y_RNA.262-201ENST00000364641 102 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC112187.1-201ENST00000455837 479 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 RPS5P7-201ENST00000456664 608 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 snoU109.2-201ENST00000459316 135 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 GLUD1P3-202ENST00000508551 200 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC131238.1-201ENST00000617135 328 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC087385.3-201ENST00000620477 187 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 IGHVIII-44-202ENST00000636235 289 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 AC241585.2-209ENST00000638217 143 ntBASIC5.68□□□□□ -1.5
PHOX2BQ99453 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHOX2BQ99453 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.68□□□□□ -1.5
PHOX2BQ99453 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHOX2BQ99453 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHOX2BQ99453 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.67□□□□□ -1.5
PHOX2BQ99453 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHOX2BQ99453 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.67□□□□□ -1.5
PHOX2BQ99453 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHOX2BQ99453 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms