Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC114322.1-201ENST00000506771 926 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC091057.2-201ENST00000602594 792 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 RNU6-16P-201ENST00000384385 107 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 MIR150-201ENST00000385048 84 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 ARPC3P2-201ENST00000457786 533 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 MTND4LP3-201ENST00000468320 276 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 MRPS33P3-201ENST00000513456 322 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 MTRNR2L2-201ENST00000604882 87 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC067863.3-201ENST00000624172 122 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 RNU6-1235P-201ENST00000384559 107 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 RNU6-997P-201ENST00000384725 107 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC092745.2-202ENST00000411880 369 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 Z75741.2-201ENST00000417272 1167 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 RNU6-498P-201ENST00000459468 107 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 AC008379.1-201ENST00000463655 464 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 NOP56P3-201ENST00000549457 385 ntBASIC0.78□□□□□ -2.28
CSMD1Q96PZ7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
CSMD1Q96PZ7 AC011155.1-201ENST00000316512 456 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC084373.1-201ENST00000603311 235 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 NACAP2-201ENST00000318548 624 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 RNU6-48P-201ENST00000384161 107 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 RNU6-72P-201ENST00000384285 79 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 OR6C66P-201ENST00000414917 930 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC080100.1-201ENST00000624239 5356 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 MIR144-201ENST00000384886 86 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AL139397.2-201ENST00000404529 772 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 RNU1-104P-201ENST00000517280 175 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC011468.4-201ENST00000603942 409 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 RNU6-84P-201ENST00000607737 102 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC006001.4-201ENST00000622243 395 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 ELL2P3-201ENST00000457883 1602 ntBASIC0.77□□□□□ -2.29
CSMD1Q96PZ7 RNA5SP499-201ENST00000363982 119 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 MTND2P16-201ENST00000419987 799 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 AL357134.1-201ENST00000445848 426 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 MIR4278-201ENST00000636094 69 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 RPS20P15-201ENST00000412792 311 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 HSPE1P14-201ENST00000605812 302 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 RNU2-41P-201ENST00000410991 178 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 RNA5SP310-201ENST00000459084 116 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 HSPE1P20-201ENST00000538133 289 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 AC022387.2-201ENST00000604050 448 ntBASIC0.76□□□□□ -2.29
CSMD1Q96PZ7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 SNORD14B-201ENST00000364533 90 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 MIR1468-201ENST00000410600 86 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 ARF4P4-201ENST00000439608 520 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 DBF4P1-201ENST00000412976 1892 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 AC138915.1-201ENST00000565427 1685 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 RNU1-101P-201ENST00000391171 127 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 AL035407.2-201ENST00000454090 378 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 AC067942.3-201ENST00000512025 362 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 MIR203B-201ENST00000636080 86 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 FAM71BP1-201ENST00000604431 523 ntBASIC0.75□□□□□ -2.29
CSMD1Q96PZ7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 BX682237.1-201ENST00000415016 335 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 SSXP9-201ENST00000417503 292 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AC104997.1-201ENST00000519761 717 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 Y_RNA.757-201ENST00000578934 114 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AP001180.3-201ENST00000582221 145 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 DUXAP4-201ENST00000603046 613 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AC000123.2-201ENST00000623124 461 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 MIR329-1-201ENST00000385028 80 ntBASIC0.74□□□□□ -2.29
CSMD1Q96PZ7 AC015922.2-201ENST00000435593 184 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms