Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RPL9P7-201ENST00000330965 580 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-653P-201ENST00000363074 106 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 MIR539-201ENST00000365690 78 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-817P-201ENST00000391083 104 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AL133388.1-201ENST00000404509 287 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AL357139.1-201ENST00000407792 426 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RNA5SP56-201ENST00000410277 118 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 BX276092.6-201ENST00000430476 250 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AL513043.1-201ENST00000439124 535 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RPL26P6-201ENST00000440913 438 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 UQCRBP2-201ENST00000447827 297 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 EIF4A1P11-201ENST00000451239 222 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 BX276092.8-201ENST00000455722 250 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RN7SKP210-201ENST00000459176 261 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-1211P-201ENST00000459179 105 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC022795.1-201ENST00000473808 480 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 VN1R105P-201ENST00000486595 910 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC024940.3-201ENST00000538551 316 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC133555.2-201ENST00000550213 292 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC007224.1-201ENST00000564410 144 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AL137141.1-201ENST00000624622 4836 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC005332.5-201ENST00000591222 2919 ntBASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CNTNAP3BQ96NU0 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC018809.2-201ENST00000602436 3823 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC010266.2-201ENST00000564741 3255 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 MIR208A-201ENST00000362287 71 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-270P-201ENST00000364131 105 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RNA5SP211-201ENST00000365516 117 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 MIR551A-201ENST00000385042 96 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 U3.22-201ENST00000391120 215 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-607P-201ENST00000411283 108 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RPL23AP26-201ENST00000412728 464 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 CYCSP33-201ENST00000414485 327 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC092447.6-201ENST00000414578 210 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 SEPT7P4-201ENST00000437076 306 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC005002.2-201ENST00000438228 269 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AL360271.2-201ENST00000447710 161 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RNU6-1037P-201ENST00000459571 107 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AL160314.1-201ENST00000490836 438 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RN7SKP60-201ENST00000516985 239 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC090281.1-201ENST00000523019 276 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AP004242.1-201ENST00000533701 349 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC104581.2-201ENST00000572227 430 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 MIR5692A1-201ENST00000580523 69 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC067852.3-201ENST00000589177 561 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC067852.4-201ENST00000590314 478 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AL133393.1-201ENST00000603277 287 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 AC024220.1-201ENST00000603675 484 ntBASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.18□□□□□ -1.58
CNTNAP3BQ96NU0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms