Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC110754.1-201ENST00000399740 601 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 RNU2-36P-201ENST00000410361 191 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 RPL30P2-201ENST00000414021 291 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 TOMM20P4-201ENST00000427861 435 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 CYCSP4-201ENST00000429682 331 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 VDAC1P3-201ENST00000434069 851 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC025750.2-201ENST00000442609 450 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC140076.1-201ENST00000449897 361 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX27Q96L92 RPL9P32-201ENST00000464118 620 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX27Q96L92 RNU2-58P-201ENST00000516403 183 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC090572.1-201ENST00000519251 160 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC100870.1-201ENST00000522035 505 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 OR5G4P-201ENST00000525251 760 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 OR5D17P-201ENST00000531492 978 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX27Q96L92 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX27Q96L92 ZNF519P2-201ENST00000557032 169 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.94□□□□□ -1.78
SNX27Q96L92 TPRKBP2-201ENST00000565969 475 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 GLUD1P4-201ENST00000590914 418 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC006116.10-201ENST00000591836 581 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC126118.1-201ENST00000607744 628 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX27Q96L92 CR381653.2-201ENST00000624041 768 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX27Q96L92 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SNX27Q96L92 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SNX27Q96L92 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX27Q96L92 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX27Q96L92 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SNX27Q96L92 CR848007.1-201ENST00000442354 1699 ntBASIC3.94□□□□□ -1.78
SNX27Q96L92 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SNX27Q96L92 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX27Q96L92 RNU6-1284P-201ENST00000363701 100 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 RNU1-39P-201ENST00000383897 165 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 U3.19-201ENST00000390893 196 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX27Q96L92 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX27Q96L92 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 DPPA2P1-201ENST00000428060 556 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 RPL23AP30-201ENST00000432419 501 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 AL138799.3-201ENST00000438968 350 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 RPL21P23-201ENST00000446654 460 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 AL671855.1-201ENST00000446875 1203 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 SNRPGP6-201ENST00000451124 220 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.93□□□□□ -1.78
SNX27Q96L92 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX27Q96L92 SNORA31.8-201ENST00000516327 108 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 SCARNA24.1-201ENST00000516465 137 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 RNU7-51P-201ENST00000516560 62 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 MED28P6-201ENST00000558776 231 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AC105224.1-201ENST00000587055 421 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.93□□□□□ -1.78
SNX27Q96L92 Z84480.1-201ENST00000605131 311 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SNX27Q96L92 AL157786.1-207ENST00000627771 695 ntBASIC3.93□□□□□ -1.78
SNX27Q96L92 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SNX27Q96L92 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SNX27Q96L92 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX27Q96L92 Y_RNA.508-201ENST00000384502 114 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 MIR181A1-201ENST00000385026 110 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 RPL5P18-201ENST00000406671 891 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 MIR548F1-201ENST00000408667 84 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX27Q96L92 USP12PX-201ENST00000432383 1057 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 GPR143P-201ENST00000434155 205 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX27Q96L92 AC079382.1-201ENST00000493346 557 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AP001086.1-201ENST00000494882 321 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 BTF3L4P4-201ENST00000506381 449 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX27Q96L92 SNORA70.18-201ENST00000516696 98 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 MTND4LP26-201ENST00000518144 282 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 HMGB1P41-201ENST00000520234 440 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX27Q96L92 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.92□□□□□ -1.78
SNX27Q96L92 AC093012.1-202ENST00000549403 582 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX27Q96L92 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX27Q96L92 AC098848.2-201ENST00000588023 330 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AL606834.2-201ENST00000602954 668 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AL391646.1-201ENST00000603860 190 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 AC010591.1-201ENST00000603941 649 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms