Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MIR3912-201ENST00000577566 105 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.65□□□□□ -1.98
USP47Q96K76 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.65□□□□□ -1.98
USP47Q96K76 AC004853.1-201ENST00000604902 698 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 AC253576.2-201ENST00000618815 580 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 MIR7111-201ENST00000619751 72 ntBASIC2.65□□□□□ -1.98
USP47Q96K76 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.65□□□□□ -1.98
USP47Q96K76 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.65□□□□□ -1.98
USP47Q96K76 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.64□□□□□ -1.99
USP47Q96K76 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
USP47Q96K76 Y_RNA.578-201ENST00000390903 88 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 DHFRP6-201ENST00000401776 268 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 MTND4P3-201ENST00000417829 541 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.64□□□□□ -1.99
USP47Q96K76 USP9YP22-201ENST00000438971 294 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 AC147055.4-201ENST00000504399 745 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 RAC1P5-201ENST00000512182 576 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 RNU6-798P-201ENST00000516912 103 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 RNU6-1028P-201ENST00000517164 93 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 HMGN1P28-201ENST00000521340 364 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 HSPA8P13-201ENST00000523715 472 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.64□□□□□ -1.99
USP47Q96K76 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.64□□□□□ -1.99
USP47Q96K76 RPL23AP88-201ENST00000605759 454 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 AC025588.4-201ENST00000615802 908 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 AC006213.4-201ENST00000616184 634 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 AC007275.1-201ENST00000621243 671 ntBASIC2.64□□□□□ -1.99
USP47Q96K76 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP47Q96K76 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
USP47Q96K76 SNORA17.3-201ENST00000391159 129 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP47Q96K76 HMGB3P2-201ENST00000411913 584 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 EIF1AXP1-201ENST00000419267 435 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.63□□□□□ -1.99
USP47Q96K76 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.63□□□□□ -1.99
USP47Q96K76 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.63□□□□□ -1.99
USP47Q96K76 DPPA3P1-201ENST00000448050 469 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 SUMO2P5-201ENST00000506790 245 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 RNU6-467P-201ENST00000517027 110 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.63□□□□□ -1.99
USP47Q96K76 AC126365.2-201ENST00000580630 379 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 MIR4781-201ENST00000585250 76 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 AC009237.15-201ENST00000610252 501 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 AC243773.3-201ENST00000613270 256 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 AP003485.1-201ENST00000625093 753 ntBASIC2.63□□□□□ -1.99
USP47Q96K76 RNU6-224P-201ENST00000384055 107 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 SNORA40.18-201ENST00000391200 128 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 RPL21P75-201ENST00000396599 483 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 RPL21P28-201ENST00000401418 483 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AL592114.1-201ENST00000403842 483 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 RPS3AP24-201ENST00000407896 734 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC007435.1-201ENST00000421086 415 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC234781.2-201ENST00000426370 994 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.62□□□□□ -1.99
USP47Q96K76 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.62□□□□□ -1.99
USP47Q96K76 RPL21P39-201ENST00000463605 483 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC011979.1-201ENST00000472300 483 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 RPL21P93-201ENST00000480465 489 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC233702.1-201ENST00000482905 502 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC093591.1-201ENST00000491435 481 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 RPL21P16-201ENST00000495531 483 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 HMGB1P28-201ENST00000507778 552 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC022483.1-201ENST00000514020 567 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP47Q96K76 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.62□□□□□ -1.99
USP47Q96K76 snoU13.31-201ENST00000607291 104 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AL161629.2-201ENST00000615347 275 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.62□□□□□ -1.99
USP47Q96K76 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
USP47Q96K76 CDR1-202ENST00000625883 1485 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 TPTE2P4-201ENST00000258589 1605 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC087359.1-201ENST00000508335 1740 ntBASIC2.62□□□□□ -1.99
USP47Q96K76 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USP47Q96K76 RPL17P12-201ENST00000413391 526 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.61□□□□□ -1.99
USP47Q96K76 MTND1P23-201ENST00000416931 372 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 HMGN2P30-201ENST00000423237 256 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC234775.1-201ENST00000454247 670 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.61□□□□□ -1.99
USP47Q96K76 snoU13.28-201ENST00000459235 104 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC079804.2-201ENST00000490376 200 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 MTCYBP17-201ENST00000503579 789 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.61□□□□□ -1.99
USP47Q96K76 RNU6-1225P-201ENST00000516336 65 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.61□□□□□ -1.99
USP47Q96K76 NBEAP1-201ENST00000554452 979 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.61□□□□□ -1.99
USP47Q96K76 ACTR3BP3-201ENST00000565577 979 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.61□□□□□ -1.99
USP47Q96K76 AC068790.3-201ENST00000602988 553 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 DUXAP4-201ENST00000603046 613 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AL133507.1-201ENST00000605269 557 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AP003476.1-201ENST00000623984 516 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 OR1S1-201ENST00000624470 978 ntBASIC2.61□□□□□ -1.99
USP47Q96K76 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms