Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 RNA5SP295-201ENST00000362655 121 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 RNU1-64P-201ENST00000365443 163 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 SNORA69-201ENST00000383895 132 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL591034.1-201ENST00000407447 340 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 RPL7L1P10-201ENST00000427790 463 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC016691.1-201ENST00000441321 413 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL353572.1-201ENST00000442490 417 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 WASF1P1-201ENST00000447560 1131 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL356010.1-201ENST00000456364 102 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 MRPS17P3-201ENST00000465453 385 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC069439.1-201ENST00000494739 167 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 SNORA40.12-201ENST00000516329 111 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC103843.2-201ENST00000530523 682 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 OR5AL2P-201ENST00000532185 920 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 NCAPGP2-201ENST00000557911 754 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC008752.3-201ENST00000588113 712 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL020997.2-201ENST00000602607 184 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC010591.1-201ENST00000603941 649 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC106900.2-201ENST00000604994 317 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 PLCE1P1-201ENST00000622094 305 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL732372.2-225ENST00000642124 456 ntBASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDK5RAP3Q96JB5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-179P-201ENST00000363350 107 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AL445189.1-201ENST00000405722 338 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 Z98941.1-201ENST00000407764 100 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 CYCSP19-201ENST00000411715 316 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 GTF2IP20-201ENST00000431663 360 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 MTATP6P23-201ENST00000440153 476 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 RPS29P15-201ENST00000458329 171 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-261P-201ENST00000459506 102 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AC233702.1-201ENST00000482905 502 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AL049874.1-201ENST00000489560 388 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 RNU6-835P-201ENST00000516974 104 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AC106785.1-201ENST00000565935 262 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 RNU1-30P-201ENST00000606575 163 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 YWHAEP7-203ENST00000622054 312 ntBASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 FER-210ENST00000628534 558 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CDK5RAP3Q96JB5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
CDK5RAP3Q96JB5 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.09□□□□□ -1.76
CDK5RAP3Q96JB5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 DEFB108F-201ENST00000344638 222 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-996P-201ENST00000365438 107 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 SMIM11P1-201ENST00000369586 178 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 U8.11-201ENST00000384699 133 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 U8.12-201ENST00000384701 133 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 MIR591-201ENST00000385290 95 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-908P-201ENST00000410160 94 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 RN7SKP202-201ENST00000410439 330 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 MTND5P17-201ENST00000418405 1603 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC018630.2-202ENST00000422992 927 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 RPL36AP6-201ENST00000435770 321 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 SEPT14P3-201ENST00000439401 183 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AL732372.2-207ENST00000445840 183 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 DPPA3P1-201ENST00000448050 469 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 SSXP4-201ENST00000451349 245 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 SEPT14P2-201ENST00000453405 183 ntBASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.08□□□□□ -1.76
CDK5RAP3Q96JB5 RNU7-182P-201ENST00000459009 62 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms