Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 U73479.1-201ENST00000618062 168 ntBASIC3.41□□□□□ -1.86
RTP4Q96DX8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 AC009033.1-201ENST00000624279 431 ntBASIC3.41□□□□□ -1.86
RTP4Q96DX8 AC009161.2-201ENST00000624626 138 ntBASIC3.41□□□□□ -1.86
RTP4Q96DX8 MIR3651-201ENST00000630427 90 ntBASIC3.41□□□□□ -1.86
RTP4Q96DX8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.41□□□□□ -1.86
RTP4Q96DX8 AC024614.3-201ENST00000637860 256 ntBASIC3.41□□□□□ -1.86
RTP4Q96DX8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTP4Q96DX8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RTP4Q96DX8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RTP4Q96DX8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RTP4Q96DX8 RNU1-70P-201ENST00000362618 164 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 RNU6-451P-201ENST00000362921 107 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 RNU6-39P-201ENST00000384344 107 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 RNU2-47P-201ENST00000410649 186 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 HMGB3P12-201ENST00000438745 556 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 RAC1P7-201ENST00000445367 377 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 RPL36AP51-201ENST00000487216 318 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC079382.1-201ENST00000493346 557 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 NIPA2P2-201ENST00000496376 1083 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 HMGN1P12-201ENST00000499125 195 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RTP4Q96DX8 MTCO2P30-201ENST00000503662 364 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 RNU1-143P-201ENST00000516296 146 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 RAB11AP2-201ENST00000545905 639 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC068790.3-201ENST00000602988 553 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 OR6R2P-201ENST00000609216 300 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 AC063943.3-201ENST00000615562 356 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 MIR8058-201ENST00000615737 89 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
RTP4Q96DX8 FER-210ENST00000628534 558 ntTSL 5 BASIC3.4□□□□□ -1.87
RTP4Q96DX8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RTP4Q96DX8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 RNA5SP383-201ENST00000362934 120 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 RNU6-263P-201ENST00000363811 107 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 RNY3P13-201ENST00000365542 102 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AL591416.1-201ENST00000404015 867 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC245291.1-201ENST00000419501 328 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC005019.1-201ENST00000436455 431 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 BNIP3P2-201ENST00000441221 577 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 RPS20P24-201ENST00000457473 361 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 SNORD121B-201ENST00000458838 81 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC025465.4-201ENST00000513422 638 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 SNORA64.4-201ENST00000516632 81 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AF235103.2-201ENST00000525753 346 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AP003385.6-201ENST00000531603 374 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC011611.1-201ENST00000552179 197 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC015917.1-201ENST00000579654 510 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AL669831.4-202ENST00000590817 238 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 AL162413.1-201ENST00000603198 110 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 C8orf59P2-201ENST00000603441 271 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 IGHV3-29-201ENST00000604817 344 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC008945.2-201ENST00000606056 604 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 HMGN2P28-201ENST00000606102 262 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC103710.2-201ENST00000609912 942 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC006329.2-201ENST00000611491 394 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AC245517.5-201ENST00000611529 162 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 YWHAEP7-203ENST00000622054 312 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 ZNF680P1-201ENST00000436625 1469 ntBASIC3.39□□□□□ -1.87
RTP4Q96DX8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms