Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC126389.1-201ENST00000477436 290 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AC233702.1-201ENST00000482905 502 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AL163973.1-201ENST00000484753 577 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AC106872.2-201ENST00000494303 480 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AC135721.1-201ENST00000497954 479 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 MTND3P22-201ENST00000510932 243 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AC010486.1-201ENST00000511793 424 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RTF1Q92541 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.57□□□□□ -1.68
RTF1Q92541 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 OR4K8P-201ENST00000578842 1048 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AC018638.8-201ENST00000588755 281 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 AC010680.4-201ENST00000605334 543 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.57□□□□□ -1.68
RTF1Q92541 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTF1Q92541 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTF1Q92541 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTF1Q92541 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.57□□□□□ -1.68
RTF1Q92541 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RTF1Q92541 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTF1Q92541 MTND4P29-201ENST00000503122 1372 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTF1Q92541 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTF1Q92541 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.56□□□□□ -1.68
RTF1Q92541 RPL7P26-201ENST00000333817 754 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 RNU1-18P-201ENST00000363062 164 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 Y_RNA.263-201ENST00000364659 114 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 RNA5SP267-201ENST00000364893 126 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 RNU6-356P-201ENST00000384140 107 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AL109755.1-201ENST00000401791 649 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AL136116.1-201ENST00000403591 381 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AL591416.1-201ENST00000404015 867 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.56□□□□□ -1.68
RTF1Q92541 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.56□□□□□ -1.68
RTF1Q92541 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.56□□□□□ -1.68
RTF1Q92541 BEND7P1-201ENST00000422058 457 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 RPL36AP53-201ENST00000432891 316 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RTF1Q92541 AC005019.1-201ENST00000436455 431 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AC005094.1-201ENST00000440420 368 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AC008155.2-201ENST00000464337 397 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 GMFBP1-201ENST00000467831 427 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 RPL7P23-201ENST00000493874 747 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 RPL38P4-201ENST00000502376 214 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.56□□□□□ -1.68
RTF1Q92541 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.56□□□□□ -1.68
RTF1Q92541 DEFB108D-201ENST00000527787 222 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.56□□□□□ -1.68
RTF1Q92541 TUG1_1.1-201ENST00000610654 145 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.56□□□□□ -1.68
RTF1Q92541 AC130324.3-201ENST00000614165 542 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTF1Q92541 AL645937.1-201ENST00000641739 1652 ntBASIC4.56□□□□□ -1.68
RTF1Q92541 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RTF1Q92541 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.56□□□□□ -1.68
RTF1Q92541 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RTF1Q92541 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTF1Q92541 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RTF1Q92541 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.56□□□□□ -1.68
RTF1Q92541 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTF1Q92541 RNU6-263P-201ENST00000363811 107 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AL158156.1-201ENST00000422509 473 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTF1Q92541 CKS1BP5-201ENST00000434172 273 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.55□□□□□ -1.68
RTF1Q92541 AMD1P1-201ENST00000457220 922 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.55□□□□□ -1.68
RTF1Q92541 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.55□□□□□ -1.68
RTF1Q92541 RN7SL601P-201ENST00000471221 293 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AC084357.1-201ENST00000473404 255 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.55□□□□□ -1.68
RTF1Q92541 RPS3AP50-201ENST00000487064 803 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.55□□□□□ -1.68
RTF1Q92541 RNU6-64P-201ENST00000517119 105 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 IGKV2-26-201ENST00000518305 343 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.55□□□□□ -1.68
RTF1Q92541 AC011712.1-201ENST00000588959 234 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AL121992.2-201ENST00000606262 256 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.55□□□□□ -1.68
RTF1Q92541 MIR6130-201ENST00000619419 109 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 RIOK3P1-201ENST00000418778 1528 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.55□□□□□ -1.68
RTF1Q92541 AC244517.1-201ENST00000606030 2086 ntBASIC4.55□□□□□ -1.68
RTF1Q92541 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
RTF1Q92541 MTND5P17-201ENST00000418405 1603 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 MFSD8-233ENST00000641482 4860 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 U3.15-201ENST00000365398 212 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.54□□□□□ -1.68
RTF1Q92541 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RTF1Q92541 RNU6-837P-201ENST00000391056 108 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AL136372.1-201ENST00000403060 228 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 RNA5SP107-201ENST00000411358 122 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AL137014.1-201ENST00000420490 1226 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.54□□□□□ -1.68
RTF1Q92541 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms