Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 SNORA31.22-201ENST00000517204 135 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AP004371.1-201ENST00000525240 214 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC087241.2-201ENST00000535801 324 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 GLYCAM1-201ENST00000546596 285 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 OR4H12P-201ENST00000556269 907 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 VN1R80P-201ENST00000597126 338 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 AC010680.3-201ENST00000604215 520 ntBASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATG4AQ8WYN0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC103710.2-202ENST00000641454 2853 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 CEP170P1-201ENST00000502249 4587 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RNU4-73P-201ENST00000363164 141 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RNA5SP42-201ENST00000364278 115 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 U3.15-201ENST00000365398 212 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RNU6-701P-201ENST00000384059 107 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RNU6-629P-201ENST00000384061 103 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.509-201ENST00000384506 99 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RNU6-510P-201ENST00000391239 108 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 UBE2V1P2-201ENST00000397758 440 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AL356432.1-201ENST00000405809 419 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RN7SKP32-201ENST00000410167 303 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RNU4-26P-201ENST00000410270 107 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RNU6-1148P-201ENST00000410992 104 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RSL24D1P6-201ENST00000426934 401 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AL365400.1-201ENST00000431854 640 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 TAAR7P-201ENST00000436141 242 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AL359073.1-201ENST00000448036 403 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC007547.1-201ENST00000462177 490 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 VN1R105P-201ENST00000486595 910 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC104806.1-201ENST00000508720 308 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 FGF7P4-201ENST00000509595 295 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC098591.2-201ENST00000510152 315 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 BTF3P12-201ENST00000519620 469 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC107953.1-201ENST00000522216 297 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC022690.1-201ENST00000526681 550 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 RPS3AP23-202ENST00000574601 686 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC005255.1-201ENST00000593748 216 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 AL590392.1-201ENST00000604960 446 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 uc_338.34-201ENST00000617467 174 ntBASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
ATG4AQ8WYN0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 MTND4P14-201ENST00000435799 1354 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 RNU6-1287P-201ENST00000362914 107 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.100-201ENST00000363141 102 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 RNU6-335P-201ENST00000364563 113 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 SNORA32.2-201ENST00000384049 122 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.535-201ENST00000384612 99 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 RNU6-1060P-201ENST00000384664 107 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 MIR30B-201ENST00000384850 88 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AL356967.1-201ENST00000406305 431 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.615-201ENST00000410769 117 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 RNU4-46P-201ENST00000410818 138 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC007390.1-201ENST00000415722 356 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AL645937.1-202ENST00000421799 937 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 RPL7P46-201ENST00000425129 740 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 MTATP6P4-201ENST00000427725 675 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 CALM2P2-201ENST00000428512 440 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC084357.1-201ENST00000473404 255 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC117522.3-201ENST00000507974 584 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 Y_RNA.665-201ENST00000516177 98 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 RNU6-840P-201ENST00000517275 65 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 ERHP1-201ENST00000523006 310 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC037471.2-201ENST00000564941 598 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 AC093913.1-201ENST00000614178 329 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 SDR42E1P2-201ENST00000614861 481 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 MIR6875-201ENST00000617506 72 ntBASIC3.78□□□□□ -1.8
ATG4AQ8WYN0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms