Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 RNU6-512P-201ENST00000364438 103 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 SNORA1.3-201ENST00000384676 136 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 RNU6-1158P-201ENST00000391167 107 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 RN7SKP285-201ENST00000410137 318 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 SNORA57.3-201ENST00000411095 141 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC080125.1-201ENST00000414888 684 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 USP9YP18-201ENST00000425912 695 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 MTCO3P30-201ENST00000426425 670 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AL451062.2-201ENST00000427515 271 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AL606489.2-201ENST00000433886 234 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 RANP8-201ENST00000444720 713 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 FDX1P2-201ENST00000450769 375 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC084357.1-201ENST00000473404 255 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 RNU6-1282P-201ENST00000516735 96 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 Y_RNA.704-201ENST00000516851 102 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 MTND4LP26-201ENST00000518144 282 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 OR5AQ1P-201ENST00000527596 927 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC103843.2-201ENST00000530523 682 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AK6P1-201ENST00000540219 478 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC025678.1-201ENST00000567861 338 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC025165.5-201ENST00000602802 578 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AC093788.1-201ENST00000609356 927 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 MIR6868-201ENST00000611215 58 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 MIR6076-201ENST00000617521 113 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
RAB40AQ8WXH6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
RAB40AQ8WXH6 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.88
RAB40AQ8WXH6 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.34□□□□□ -1.88
RAB40AQ8WXH6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RAB40AQ8WXH6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RAB40AQ8WXH6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RNA5SP399-201ENST00000364003 117 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 SNORD115-7-201ENST00000365306 82 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 Y_RNA.576-201ENST00000384781 102 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 CIR1P3-201ENST00000405137 479 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC007390.1-201ENST00000415722 356 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 ELOCP14-201ENST00000428070 331 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 CALM2P2-201ENST00000428512 440 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RPL23AP69-201ENST00000431134 458 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 HSPD1P21-201ENST00000436541 245 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 ELOCP7-201ENST00000439968 331 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 MTND1P18-201ENST00000448191 573 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL136097.1-201ENST00000456945 913 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL162395.1-201ENST00000457882 422 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RNU6-420P-201ENST00000458780 107 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC004801.2-202ENST00000463559 283 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RPL7L1P8-201ENST00000469911 741 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC083798.1-201ENST00000472671 131 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC084198.1-201ENST00000477747 402 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL135752.1-201ENST00000479477 471 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL049830.2-201ENST00000480072 201 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RPL30P14-201ENST00000482744 348 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC104806.1-201ENST00000508720 308 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC011352.1-201ENST00000512300 793 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC105417.1-201ENST00000514691 285 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RNU6-718P-201ENST00000516166 105 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 SNORA40.12-201ENST00000516329 111 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 RNU6-143P-201ENST00000516942 93 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.33□□□□□ -1.88
RAB40AQ8WXH6 AL157687.1-201ENST00000554853 619 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms