Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC008568.2-201ENST00000623862 2313 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 MTND5P17-201ENST00000418405 1603 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 Y_RNA.9-201ENST00000362354 101 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 RNU1-33P-201ENST00000364249 162 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 RNU4-12P-201ENST00000365233 139 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 RNU4-48P-201ENST00000365559 182 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 Y_RNA.481-201ENST00000384373 102 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 DBIP2-201ENST00000419076 262 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL356867.1-201ENST00000429623 299 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 DDX3P2-201ENST00000446138 111 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 RPL9P32-201ENST00000464118 620 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 MRPS17P3-201ENST00000465453 385 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 TRBV12-2-201ENST00000489763 344 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AC010342.1-201ENST00000514047 877 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 RNU6-1256P-201ENST00000516539 103 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 OR5AQ1P-201ENST00000527596 927 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AP000889.1-201ENST00000530968 660 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 OR5B19P-201ENST00000531766 928 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 OR5BN1P-201ENST00000532955 829 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL512310.1-201ENST00000548639 172 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL512360.1-201ENST00000555346 234 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AC011471.1-201ENST00000585766 187 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AC008536.2-201ENST00000607284 349 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AP001596.2-201ENST00000608410 312 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 FAM35DP-201ENST00000323387 2712 ntBASIC3.63□□□□□ -1.83
HMGB4Q8WW32 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGB4Q8WW32 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL049781.1-201ENST00000623195 3585 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 RNU4-35P-201ENST00000362588 141 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 RNU6-1322P-201ENST00000364309 107 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 Y_RNA.450-201ENST00000384198 113 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 SNORA24.1-201ENST00000384401 135 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 MIR493-201ENST00000385254 89 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 RNU6-1158P-201ENST00000391167 107 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL139397.2-201ENST00000404529 772 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 RNA5SP120-201ENST00000410900 112 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 OR51A5P-201ENST00000415429 942 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 ATP5JP1-201ENST00000431631 322 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 FDX1P2-201ENST00000450769 375 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL356010.1-201ENST00000456364 102 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL121769.1-201ENST00000469473 401 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AC069499.1-201ENST00000489433 509 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 RNU6-718P-201ENST00000516166 105 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 SUMO2P20-201ENST00000520803 283 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AC090281.1-201ENST00000523019 276 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL157687.1-201ENST00000554853 619 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL360157.1-201ENST00000565962 87 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AC068944.2-201ENST00000610373 403 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL365204.3-201ENST00000612448 685 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 U4.6-201ENST00000621618 127 ntBASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGB4Q8WW32 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 Y_RNA.381-201ENST00000365666 102 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms