Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 RNU6-522P-201ENST00000364497 107 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 U3.12-201ENST00000364498 214 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 RNU4-66P-201ENST00000365199 138 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 RNU6-701P-201ENST00000384059 107 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 Y_RNA.529-201ENST00000384586 119 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 RNU6-510P-201ENST00000391239 108 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 Y_RNA.615-201ENST00000410769 117 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 HSPE1P12-201ENST00000412576 301 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC068533.1-201ENST00000418542 415 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 RPL7P46-201ENST00000425129 740 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC091390.1-201ENST00000433904 331 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 TAAR7P-201ENST00000436141 242 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 SNRPFP3-201ENST00000457792 225 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 RPL21P99-201ENST00000480369 423 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 HMGB1P22-201ENST00000505315 124 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 RNU6-685P-201ENST00000517088 95 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC107953.1-201ENST00000522216 297 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC087241.2-201ENST00000535801 324 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC243972.3-201ENST00000539655 198 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 GLYCAM1-201ENST00000546596 285 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC091516.1-201ENST00000549191 703 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AL121576.1-201ENST00000556055 276 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 SNORD84-203ENST00000584275 78 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 SNRPGP15-201ENST00000600149 222 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 SDR42E1P2-201ENST00000614861 481 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC010133.1-201ENST00000615809 842 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AL589994.2-201ENST00000621124 579 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 AC112487.2-201ENST00000637950 304 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 MTND4P35-201ENST00000604257 1375 ntBASIC4.09□□□□□ -1.75
CCHCR1Q8TD31 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 RN7SKP227-201ENST00000364445 330 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 RNA5SP235-201ENST00000365411 114 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 SNORA36C-201ENST00000384289 132 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 RNU6-328P-201ENST00000390887 106 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AL356432.1-201ENST00000405809 419 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 RNU4-46P-201ENST00000410818 138 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 EEF1A1P40-201ENST00000412883 573 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC024082.2-201ENST00000434771 238 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 IFNA20P-201ENST00000436840 528 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC007547.1-201ENST00000462177 490 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 RPL23AP55-201ENST00000498163 452 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC104806.1-201ENST00000508720 308 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC112206.3-201ENST00000514578 389 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 Y_RNA.665-201ENST00000516177 98 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 RNU6-390P-201ENST00000516259 103 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 SNORA31.20-201ENST00000517111 133 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC008521.1-201ENST00000587471 187 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC067852.3-201ENST00000589177 561 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AL357559.1-201ENST00000622228 274 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 AC004925.1-201ENST00000624256 2706 ntBASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCHCR1Q8TD31 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 TPTE2P4-201ENST00000258589 1605 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 MTND4P14-201ENST00000435799 1354 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RNU6-1287P-201ENST00000362914 107 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 Y_RNA.100-201ENST00000363141 102 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RNU4-73P-201ENST00000363164 141 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RNA5SP130-201ENST00000364431 114 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RNU4-76P-201ENST00000364509 141 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 Y_RNA.356-201ENST00000365475 113 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RNU6-14P-201ENST00000384630 106 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RNU6-1060P-201ENST00000384664 107 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RNU4-26P-201ENST00000410270 107 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 MTND3P8-201ENST00000412909 339 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 AC007390.1-201ENST00000415722 356 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 AL356095.1-201ENST00000417217 199 ntBASIC4.07□□□□□ -1.76
CCHCR1Q8TD31 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms