Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RN7SKP285-201ENST00000410137 318 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RNU6-908P-201ENST00000410160 94 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 MTCYBP8-201ENST00000422855 651 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 MTCO1P20-201ENST00000425366 358 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AL590383.1-201ENST00000428602 75 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC007919.1-201ENST00000429380 217 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 HMGB1P27-201ENST00000431429 603 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 NEK4P1-201ENST00000433383 879 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC000111.3-201ENST00000433478 193 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC073415.1-201ENST00000449240 153 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AL118520.1-201ENST00000450770 291 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RNU6-953P-201ENST00000459154 107 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC084198.1-201ENST00000477747 402 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RPL39P36-201ENST00000490784 156 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RPL30P5-201ENST00000494923 336 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC026784.1-201ENST00000507986 352 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 APOOP4-201ENST00000513530 597 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC105417.1-201ENST00000514691 285 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RNU6-123P-201ENST00000516163 102 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RN7SKP209-201ENST00000516888 304 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC109635.3-201ENST00000529536 185 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 TRAV28-201ENST00000557548 323 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 MIR4703-201ENST00000577728 79 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AL161798.1-201ENST00000604630 131 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC022893.3-201ENST00000607665 437 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC009570.1-201ENST00000609599 745 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 RMST_8.1-201ENST00000610287 165 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC099778.2-201ENST00000610904 211 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AL354950.2-201ENST00000617939 290 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.33□□□□□ -1.88
DNAAF1Q8NEP3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 RNA5SP443-201ENST00000363083 132 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 RNU6-190P-201ENST00000384154 102 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 PPIAP31-201ENST00000405422 495 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 USP9YP27-201ENST00000418455 438 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AL691449.1-201ENST00000426570 421 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AL591212.2-201ENST00000433923 257 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 PIGFP3-201ENST00000441918 722 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 FABP5P13-201ENST00000452144 328 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 RNU6-261P-201ENST00000459506 102 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AC092989.1-201ENST00000481235 277 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 FAM92A1P2-202ENST00000504766 877 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AC117522.3-201ENST00000507974 584 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 RNA5SP503-201ENST00000517047 117 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 MRPL49P2-201ENST00000521066 465 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AC092325.1-201ENST00000566449 554 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AP001094.1-201ENST00000579805 193 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AL137849.1-201ENST00000604767 169 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AL356321.1-201ENST00000621360 228 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 MIR492-201ENST00000638676 116 ntBASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DNAAF1Q8NEP3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.31□□□□□ -1.88
DNAAF1Q8NEP3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
DNAAF1Q8NEP3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms