Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RPL35AP22-201ENST00000436855 335 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AF228730.2-201ENST00000438784 848 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 HMGB1P37-201ENST00000439613 609 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AC005094.1-201ENST00000440420 368 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 TXNP1-201ENST00000441872 371 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AC005008.1-201ENST00000456151 612 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 RPS29P2-201ENST00000479278 136 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AC012123.2-201ENST00000485809 248 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 MTCO3P44-201ENST00000510977 541 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 RNU6-1092P-201ENST00000516955 87 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 RNU6-1137P-201ENST00000517073 99 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 OR11H5P-201ENST00000554039 926 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 MIR3668-201ENST00000582138 75 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 MIR4293-201ENST00000584305 78 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AC007938.3-201ENST00000604965 623 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 AL157817.1-201ENST00000614264 790 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 ZNF962P-201ENST00000443465 3140 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.84□□□□□ -1.63
LINC00116Q8NCU8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
LINC00116Q8NCU8 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
LINC00116Q8NCU8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LINC00116Q8NCU8 AC006484.1-201ENST00000435086 1884 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AL442128.2-201ENST00000620246 1824 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 GABPAP-201ENST00000419271 1356 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 Y_RNA.112-201ENST00000363250 102 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 RNU6-960P-201ENST00000364056 120 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 SNORD51-201ENST00000384320 80 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 Y_RNA.482-201ENST00000384377 111 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 RPL30P2-201ENST00000414021 291 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 RAC1P6-201ENST00000423911 575 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 SKA2P1-201ENST00000425592 390 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC108059.2-201ENST00000434626 151 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 MIR2053-201ENST00000459295 91 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AL135752.1-201ENST00000479477 471 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC006517.1-201ENST00000480485 328 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC108078.2-201ENST00000510750 236 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 RN7SKP295-201ENST00000517264 153 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 RANP9-201ENST00000519957 271 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 COX6CP5-201ENST00000527162 228 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 PTP4A1P6-201ENST00000531034 478 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC009852.2-201ENST00000567898 485 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 MIR4503-201ENST00000582187 83 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC012409.4-201ENST00000612923 249 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 AC133104.2-201ENST00000615272 193 ntBASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.83□□□□□ -1.64
LINC00116Q8NCU8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 ZNF33CP-201ENST00000432492 2030 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 AC117470.1-201ENST00000381974 330 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 Y_RNA.401-201ENST00000383965 117 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RNU6-601P-201ENST00000384540 107 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 AL139397.2-201ENST00000404529 772 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 MIR1271-201ENST00000408537 86 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RNU2-47P-201ENST00000410649 186 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RPS12P5-201ENST00000423449 371 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 CYCSP4-201ENST00000429682 331 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RPL12P18-201ENST00000437175 325 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 SCARNA18-201ENST00000459004 134 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RPL21P8-201ENST00000465083 535 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RPL21P93-201ENST00000480465 489 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 DEFB109F-201ENST00000491870 277 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RPL23AP55-201ENST00000498163 452 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RAC1P2-201ENST00000511164 579 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 RNU6-189P-201ENST00000516120 101 ntBASIC4.82□□□□□ -1.64
LINC00116Q8NCU8 HMGN1P28-201ENST00000521340 364 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms