Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-533P-201ENST00000384144 107 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 RNU6-198P-201ENST00000384258 104 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 MIR181A2-201ENST00000384863 110 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 MIR19A-201ENST00000384878 82 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 MIR592-201ENST00000384959 97 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 U3.19-201ENST00000390893 196 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 SNORA48.7-201ENST00000391302 135 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 SNORA26.8-201ENST00000391306 124 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AL512633.1-201ENST00000399931 655 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 BTF3L4P3-201ENST00000418879 476 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC099548.1-201ENST00000421443 426 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC097713.2-201ENST00000430199 356 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 RPL35AP22-201ENST00000436855 335 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 COX6CP12-201ENST00000446748 202 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC109486.1-201ENST00000486833 374 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC055855.1-201ENST00000489563 579 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC008716.1-201ENST00000511084 513 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 NRON-201ENST00000517270 370 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC007458.1-201ENST00000542812 373 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AL133153.1-201ENST00000557756 303 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 UBL5P2-201ENST00000583788 219 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 MIR548AB-201ENST00000584917 84 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC002545.1-201ENST00000592511 181 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC245517.5-201ENST00000611529 162 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AL392048.1-201ENST00000613946 534 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC091953.5-201ENST00000622919 233 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 CU459211.1-201ENST00000635667 749 ntBASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC71LQ8N9Z2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.4□□□□□ -2.02
CCDC71LQ8N9Z2 AC007785.2-201ENST00000598627 1916 ntBASIC2.4□□□□□ -2.02
CCDC71LQ8N9Z2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.4□□□□□ -2.02
CCDC71LQ8N9Z2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC71LQ8N9Z2 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC71LQ8N9Z2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 RNY4P24-201ENST00000362735 96 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 RPL21P24-201ENST00000413752 448 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 NPM1P11-201ENST00000417106 855 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC090960.1-201ENST00000421072 306 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC018644.1-201ENST00000429934 551 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 HMGN2P31-201ENST00000432430 273 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 MTATP6P30-201ENST00000443540 664 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 CBWD4P-201ENST00000445695 655 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AL590365.1-201ENST00000450788 243 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC008481.1-201ENST00000463278 396 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 FAM133DP-201ENST00000464802 691 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC010631.1-201ENST00000474150 156 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AP000797.1-201ENST00000478870 387 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 RN7SL297P-201ENST00000483161 293 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 RPL23AP70-201ENST00000483361 460 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 CDC42P4-201ENST00000510507 563 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 RNA5SP471-201ENST00000516971 106 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 RNU6-1003P-201ENST00000517099 105 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC060788.1-201ENST00000521318 469 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC123904.3-201ENST00000547218 814 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 RPL23AP84-201ENST00000571193 464 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 MIR5697-201ENST00000578045 78 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 MIR1254-2-201ENST00000579553 63 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 MIR3605-201ENST00000583214 100 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 DPPA3P3-201ENST00000603842 430 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AL035413.2-201ENST00000604801 525 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC004908.2-201ENST00000609090 574 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AC093838.1-201ENST00000613014 469 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 SDR42E1P2-201ENST00000614861 481 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 AL161629.2-201ENST00000615347 275 ntBASIC2.4□□□□□ -2.03
CCDC71LQ8N9Z2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms