Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC004022.1-201ENST00000447766 1066 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 MTND1P18-201ENST00000448191 573 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 RPS15AP27-201ENST00000449183 343 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS8Q8N3P4 snoU13.3-201ENST00000459441 104 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS8Q8N3P4 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS8Q8N3P4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.68□□□□□ -2.14
VPS8Q8N3P4 AC004908.2-201ENST00000609090 574 ntBASIC1.68□□□□□ -2.14
VPS8Q8N3P4 SNORD114-27-201ENST00000363766 70 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 Y_RNA.466-201ENST00000384294 113 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AL358075.3-201ENST00000426289 226 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AC068781.1-201ENST00000488231 618 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AC020699.1-201ENST00000505161 445 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AP000907.2-201ENST00000530827 353 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AC007229.1-201ENST00000590455 412 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AL450336.1-201ENST00000605180 586 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AP005137.2-201ENST00000609238 400 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AC008121.3-201ENST00000618726 433 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 AL137003.2-201ENST00000606924 2538 ntBASIC1.67□□□□□ -2.14
VPS8Q8N3P4 RNU6-1293P-201ENST00000384077 107 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 MIR513A1-201ENST00000385138 129 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 HMGB3P31-201ENST00000413333 595 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 SEPT2P1-201ENST00000419651 180 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 SNRPEP10-201ENST00000420249 274 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC096745.1-201ENST00000509945 370 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC074029.2-201ENST00000551045 634 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC087481.2-201ENST00000565492 330 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 MIR548Y-201ENST00000582739 110 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC079395.3-201ENST00000615161 484 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC109809.1-201ENST00000619665 545 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 RNU6-156P-201ENST00000621869 107 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 RNU6-1251P-201ENST00000364502 107 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 RNU6-244P-201ENST00000391028 104 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 EIF4EP4-201ENST00000424916 578 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 SNRPGP16-201ENST00000533275 226 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AC013553.2-201ENST00000604244 589 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AL355297.2-201ENST00000604792 129 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
VPS8Q8N3P4 AL360181.4-201ENST00000621752 134 ntBASIC1.66□□□□□ -2.14
VPS8Q8N3P4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.65□□□□□ -2.14
VPS8Q8N3P4 RNU5D-1-201ENST00000363299 116 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 MIR222-201ENST00000384992 110 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 U3.20-201ENST00000390909 217 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 XKRYP1-201ENST00000423438 492 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 XKRYP2-201ENST00000432915 492 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AC104108.1-201ENST00000509930 412 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AC008837.2-201ENST00000513076 418 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS8Q8N3P4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS8Q8N3P4 MIR3609-201ENST00000582661 80 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AC078899.2-201ENST00000595282 212 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 MTCO2P22-201ENST00000603246 681 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.65□□□□□ -2.15
VPS8Q8N3P4 AC097504.2-201ENST00000608088 454 ntBASIC1.65□□□□□ -2.15
VPS8Q8N3P4 RNU6-263P-201ENST00000363811 107 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 RNU4-38P-201ENST00000364472 129 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 MT-TC-201ENST00000387405 66 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 MIR767-201ENST00000390228 109 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 U3.29-201ENST00000391296 212 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 RPL21P1-201ENST00000399532 476 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 COX6CP18-201ENST00000448769 222 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 BX248409.1-201ENST00000455497 255 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AC022447.3-201ENST00000506865 495 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 RN7SKP49-201ENST00000516675 260 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AC090666.1-201ENST00000578241 445 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 MTATP6P3-201ENST00000581686 676 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AC012254.4-201ENST00000588843 273 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 XIAPP1-201ENST00000603162 600 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 SNORD114-21-201ENST00000606412 72 ntBASIC1.64□□□□□ -2.15
VPS8Q8N3P4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.63□□□□□ -2.15
VPS8Q8N3P4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.63□□□□□ -2.15
VPS8Q8N3P4 DDX10P1-201ENST00000448545 1933 ntBASIC1.63□□□□□ -2.15
VPS8Q8N3P4 RNU6-198P-201ENST00000384258 104 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms