Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 Y_RNA.510-201ENST00000384511 114 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 RN7SKP140-201ENST00000411196 284 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC009963.1-201ENST00000417265 157 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 USP9YP24-201ENST00000434374 697 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AL714022.1-201ENST00000439897 151 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 USP9YP17-201ENST00000444617 696 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 MTCO1P27-201ENST00000448269 226 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 ATG12P2-201ENST00000456830 416 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC116337.2-201ENST00000477662 156 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC010587.2-201ENST00000511727 448 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC109329.2-201ENST00000519658 482 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AP001646.1-201ENST00000527936 915 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 HMGB1P14-201ENST00000557424 591 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC009127.3-201ENST00000570531 403 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 BNIP3P39-201ENST00000601077 554 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC090186.1-201ENST00000605991 572 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC009974.1-201ENST00000608881 455 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC046143.2-201ENST00000609789 160 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 CU459211.1-201ENST00000635667 749 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 AC092447.10-201ENST00000620607 1652 ntBASIC2.6□□□□□ -1.99
CCDC65Q8IXS2 RNU6-97P-201ENST00000363387 104 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 RNU6-1078P-201ENST00000364522 103 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 RNU6-637P-201ENST00000384050 107 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 RNU6-906P-201ENST00000384700 70 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AL356421.1-201ENST00000403255 413 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AL513475.1-201ENST00000406602 315 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 PIGPP2-201ENST00000411569 458 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 TPMTP3-201ENST00000411928 735 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 MORF4L1P6-201ENST00000418771 268 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 RNU6-420P-201ENST00000458780 107 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 snoU13.28-201ENST00000459235 104 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC024589.1-201ENST00000512207 263 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 RNU6-1282P-201ENST00000516735 96 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC124947.2-202ENST00000552735 133 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC112220.3-201ENST00000605502 502 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC092953.2-201ENST00000608000 699 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC243829.7-201ENST00000633081 225 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 TPTE2P4-201ENST00000258589 1605 ntBASIC2.59□□□□□ -1.99
CCDC65Q8IXS2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC65Q8IXS2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC65Q8IXS2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 RNU6-461P-201ENST00000364195 107 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 RNU1-39P-201ENST00000383897 165 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 RNU6-636P-201ENST00000384598 107 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 RNU6-925P-201ENST00000384629 104 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 RNU6-754P-201ENST00000391166 107 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 Z85995.1-201ENST00000415547 335 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 USP9YP27-201ENST00000418455 438 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC106883.1-201ENST00000418805 562 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 BNIP3P2-201ENST00000441221 577 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 FGF7P5-201ENST00000441829 291 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 PTENP1-201ENST00000447117 1215 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC092155.2-201ENST00000454675 477 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC233279.1-201ENST00000455300 423 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC104563.1-201ENST00000476147 376 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 FAM172BP-201ENST00000487497 1089 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms