Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC004024.1-201ENST00000549244 247 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AL391840.1-201ENST00000571144 367 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC006557.5-201ENST00000603126 811 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC103710.2-201ENST00000609912 942 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC005332.10-201ENST00000612725 619 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC004696.1-201ENST00000614345 607 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HERC6Q8IVU3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 MFSD8-233ENST00000641482 4860 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC118273.1-201ENST00000525324 3006 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 MIR422A-201ENST00000362286 90 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 RNU6-511P-201ENST00000363496 107 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 RNU4-1-201ENST00000363925 141 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AL391417.1-201ENST00000404100 426 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 CBWD4P-201ENST00000445695 655 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 RNA5SP310-201ENST00000459084 116 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 RPL23AP62-201ENST00000463396 453 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC078785.3-201ENST00000476607 425 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC006445.1-201ENST00000491925 405 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 RPL7P47-201ENST00000497299 556 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 RN7SKP258-201ENST00000517151 304 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 OR5G4P-201ENST00000525251 760 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC022690.1-201ENST00000526681 550 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AP003033.1-201ENST00000527244 415 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC005951.2-201ENST00000576282 495 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC091805.2-201ENST00000603848 235 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 NDUFA8P1-201ENST00000605525 367 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 AC009570.1-201ENST00000609599 745 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 MIR6076-201ENST00000617521 113 ntBASIC3.69□□□□□ -1.82
HERC6Q8IVU3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HERC6Q8IVU3 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RNU6-741P-201ENST00000383889 107 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 U3.39-201ENST00000408569 239 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RNU6-195P-201ENST00000411352 109 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AC007283.2-201ENST00000424739 197 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 TAAR7P-201ENST00000436141 242 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RPS24P1-201ENST00000438550 371 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AL359385.1-201ENST00000456509 365 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AL136097.1-201ENST00000456945 913 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RN7SL594P-201ENST00000470590 287 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RPS20P22-201ENST00000473700 357 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RN7SL429P-201ENST00000479090 223 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RN7SL489P-201ENST00000486185 223 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RN7SL327P-201ENST00000488659 223 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RNU6-430P-201ENST00000517078 107 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RPS3AP4-201ENST00000555161 764 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 RN7SL853P-201ENST00000617250 223 ntBASIC3.68□□□□□ -1.82
HERC6Q8IVU3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HERC6Q8IVU3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.67□□□□□ -1.82
HERC6Q8IVU3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms