Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC097065.2-201ENST00000608159 533 ntBASIC3.07□□□□□ -1.92
LINC00346Q8IVM7 AL592295.2-201ENST00000612578 206 ntBASIC3.07□□□□□ -1.92
LINC00346Q8IVM7 AL359547.2-201ENST00000615810 418 ntBASIC3.07□□□□□ -1.92
LINC00346Q8IVM7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LINC00346Q8IVM7 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
LINC00346Q8IVM7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
LINC00346Q8IVM7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LINC00346Q8IVM7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 RNA5SP124-201ENST00000362739 110 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 RNU6-778P-201ENST00000363269 103 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 RNU6-1097P-201ENST00000363586 107 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 RNU6-108P-201ENST00000365558 107 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AL359837.1-201ENST00000381357 287 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 RNU6-39P-201ENST00000384344 107 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 Y_RNA.553-201ENST00000384670 102 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 SNORA57.1-201ENST00000391227 145 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 PIGFP2-201ENST00000421400 651 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AL645937.1-202ENST00000421799 937 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 CYCSP32-201ENST00000440548 321 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC098831.1-201ENST00000440661 216 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC003071.1-201ENST00000451219 789 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC093899.1-201ENST00000457984 376 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 RPS15AP34-201ENST00000487776 387 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC105313.1-201ENST00000509121 353 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC104619.4-201ENST00000510773 249 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AP003122.3-201ENST00000526316 255 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC084851.1-201ENST00000529105 249 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC110491.1-201ENST00000562191 2010 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC025281.1-201ENST00000567026 265 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AC022893.3-201ENST00000607665 437 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 AL121772.2-201ENST00000614331 297 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LINC00346Q8IVM7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 ZNF285B-201ENST00000561698 1767 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AL390237.1-201ENST00000404226 1415 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 RNU6-188P-201ENST00000364207 107 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 RNU6-169P-201ENST00000365336 107 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AP002088.1-201ENST00000382740 395 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 RNU6-641P-201ENST00000384006 107 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC098614.2-201ENST00000426040 255 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AL451062.2-201ENST00000427515 271 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 ISCA1P6-201ENST00000427740 390 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 GPR143P-201ENST00000434155 205 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 MTND2P22-201ENST00000444325 1033 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 USP9YP29-201ENST00000445112 563 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC022364.2-201ENST00000457963 554 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 SNORD105B-201ENST00000458770 79 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 RPS27P26-201ENST00000494583 239 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 MTND4P2-201ENST00000507767 1203 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC093331.1-201ENST00000521474 169 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AL109618.2-201ENST00000605527 211 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AL139286.2-201ENST00000606838 396 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AC090582.1-201ENST00000636321 199 ntBASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
LINC00346Q8IVM7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms