Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-1013P-201ENST00000384180 107 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 MIR483-201ENST00000385070 76 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AL121834.1-202ENST00000404494 277 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AC079780.1-201ENST00000428259 207 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 PRPS1P1-201ENST00000445305 876 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 NIPA2P5-201ENST00000452282 464 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 SCARNA18-201ENST00000459004 134 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AC110792.1-201ENST00000491826 472 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.08□□□□□ -1.6
USP48Q86UV5 MLLT10P2-201ENST00000506434 249 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 RN7SKP60-201ENST00000516985 239 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.08□□□□□ -1.6
USP48Q86UV5 AC020661.2-201ENST00000560114 134 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AC012182.1-201ENST00000570133 895 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 RPL23AP84-201ENST00000571193 464 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.08□□□□□ -1.6
USP48Q86UV5 AC008638.3-201ENST00000603341 463 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AL139395.1-201ENST00000603662 160 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AC007179.3-201ENST00000604976 235 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AL592436.1-201ENST00000605135 558 ntBASIC5.08□□□□□ -1.6
USP48Q86UV5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.08□□□□□ -1.6
USP48Q86UV5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP48Q86UV5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
USP48Q86UV5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP48Q86UV5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.08□□□□□ -1.6
USP48Q86UV5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
USP48Q86UV5 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
USP48Q86UV5 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.07□□□□□ -1.6
USP48Q86UV5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.07□□□□□ -1.6
USP48Q86UV5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP48Q86UV5 SNORD74.4-201ENST00000364129 80 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.07□□□□□ -1.6
USP48Q86UV5 RNU6-817P-201ENST00000391083 104 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 SNORD66.1-201ENST00000391230 76 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.07□□□□□ -1.6
USP48Q86UV5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.07□□□□□ -1.6
USP48Q86UV5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.07□□□□□ -1.6
USP48Q86UV5 RNU6-953P-201ENST00000459154 107 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 AC083904.1-201ENST00000487828 231 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 AC106872.2-201ENST00000494303 480 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.07□□□□□ -1.6
USP48Q86UV5 RNA5SP360-201ENST00000516555 118 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 Y_RNA.689-201ENST00000516589 107 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 RNA5SP73-201ENST00000516744 108 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.07□□□□□ -1.6
USP48Q86UV5 AC022882.1-201ENST00000532142 501 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.07□□□□□ -1.6
USP48Q86UV5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP48Q86UV5 AC106782.4-201ENST00000568264 210 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 FAM60BP-201ENST00000578364 658 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 BNIP3P25-201ENST00000596023 559 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 SRGNP1-201ENST00000603392 451 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 AC113139.1-201ENST00000605049 239 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 AC103710.3-201ENST00000608157 948 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 MIR6500-201ENST00000622700 86 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.07□□□□□ -1.6
USP48Q86UV5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP48Q86UV5 PRO1804-201ENST00000623780 2050 ntBASIC5.07□□□□□ -1.6
USP48Q86UV5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.07□□□□□ -1.6
USP48Q86UV5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP48Q86UV5 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP48Q86UV5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
USP48Q86UV5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP48Q86UV5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP48Q86UV5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
USP48Q86UV5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP48Q86UV5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
USP48Q86UV5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
USP48Q86UV5 SNORA36C-201ENST00000384289 132 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 RNU6-1127P-201ENST00000384580 107 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 RNA5SP111-201ENST00000411386 101 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.06□□□□□ -1.6
USP48Q86UV5 AL353729.1-201ENST00000425044 720 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.06□□□□□ -1.6
USP48Q86UV5 AC069285.2-201ENST00000440210 275 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.06□□□□□ -1.6
USP48Q86UV5 AC104058.1-201ENST00000448028 297 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.06□□□□□ -1.6
USP48Q86UV5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.06□□□□□ -1.6
USP48Q86UV5 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
USP48Q86UV5 AP000763.2-201ENST00000540641 163 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.06□□□□□ -1.6
USP48Q86UV5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.06□□□□□ -1.6
USP48Q86UV5 AC092747.3-201ENST00000603769 301 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 DPPA3P3-201ENST00000603842 430 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 MIR432-201ENST00000606207 94 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP48Q86UV5 AC012314.7-201ENST00000619693 93 ntBASIC5.06□□□□□ -1.6
USP48Q86UV5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
USP48Q86UV5 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
USP48Q86UV5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
USP48Q86UV5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.05□□□□□ -1.6
USP48Q86UV5 RNU4-6P-201ENST00000410804 122 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 POLHP1-201ENST00000411806 470 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AC004552.1-201ENST00000419089 348 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 HMGB1P27-201ENST00000431429 603 ntBASIC5.05□□□□□ -1.6
USP48Q86UV5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.05□□□□□ -1.6
USP48Q86UV5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms