Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 DEFB108F-201ENST00000344638 222 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 RNU6-837P-201ENST00000391056 108 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 ARL2BPP3-201ENST00000421226 480 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC025768.1-201ENST00000510057 267 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC133963.2-201ENST00000513686 578 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AL031775.1-201ENST00000607014 887 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 MIR338-201ENST00000636369 67 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 SUMO2P12-201ENST00000405924 140 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC073264.1-201ENST00000411508 416 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 RPL27AP8-201ENST00000424277 446 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 UBE2V1P13-201ENST00000436983 439 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC139103.1-201ENST00000534696 1030 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC055764.2-201ENST00000610089 670 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.8□□□□□ -2.28
CSMD3Q7Z407 AC008555.8-201ENST00000623602 2168 ntBASIC0.8□□□□□ -2.28
CSMD3Q7Z407 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 OR5AQ1P-201ENST00000527596 927 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC008739.2-201ENST00000597006 317 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC074117.2-201ENST00000417130 397 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 HMGN2P30-201ENST00000423237 256 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 RPL7P34-201ENST00000433316 712 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC097468.3-201ENST00000607956 456 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC110079.1-202ENST00000635213 138 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 RBBP8P1-201ENST00000449447 1844 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 OR6K5P-201ENST00000447050 945 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 RPS27AP10-201ENST00000496103 208 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 KATNBL1P4-201ENST00000503545 918 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC022447.3-201ENST00000506865 495 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC007229.1-201ENST00000590455 412 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 SEPT7P9-203ENST00000604116 343 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AC008962.1-201ENST00000605729 304 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 MIR6513-201ENST00000621188 64 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AL138955.1-201ENST00000622881 1040 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 AL356118.1-201ENST00000635272 1078 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 ZNF37BP-203ENST00000452306 1352 ntBASIC0.79□□□□□ -2.28
CSMD3Q7Z407 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CSMD3Q7Z407 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC009902.3-201ENST00000606235 2172 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC087343.1-201ENST00000477341 475 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC022493.1-201ENST00000492984 337 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC087272.1-201ENST00000523624 533 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 OR4V1P-201ENST00000525394 1140 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC009229.3-201ENST00000608056 282 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 MIR7974-201ENST00000615835 79 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC097655.1-201ENST00000635075 318 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC087359.1-201ENST00000508335 1740 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 Y_RNA.62-201ENST00000362840 99 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 RNU1-105P-201ENST00000363470 161 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 FO393413.1-201ENST00000402892 195 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 PGBD4P6-201ENST00000421501 610 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC018630.2-202ENST00000422992 927 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 VN1R108P-201ENST00000431580 830 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 UBBP3-201ENST00000445497 241 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 RNA5SP364-201ENST00000516938 78 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AP003117.1-201ENST00000602771 554 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC073111.2-201ENST00000605657 1075 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 AC091925.1-201ENST00000623204 462 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 MIR6086-201ENST00000638065 55 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 FAM157B-203ENST00000639350 358 ntBASIC0.78□□□□□ -2.28
CSMD3Q7Z407 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CSMD3Q7Z407 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms