Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 MTND1P31-201ENST00000449206 961 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 MTATP6P7-201ENST00000453315 681 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 RPS3P1-201ENST00000456781 192 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 RPL26P9-201ENST00000457466 433 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 KLF3P2-201ENST00000465138 268 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AL121769.1-201ENST00000469473 401 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC023141.11-201ENST00000508864 202 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC008837.2-201ENST00000513076 418 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 RNY4P37-201ENST00000516225 96 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 RNA5SP82-201ENST00000516707 92 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 RNU6-840P-201ENST00000517275 65 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 BTF3P12-201ENST00000519620 469 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 HMGN1P28-201ENST00000521340 364 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AP001646.1-201ENST00000527936 915 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC090115.4-201ENST00000609970 188 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AL137847.3-201ENST00000611521 109 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC104237.2-201ENST00000612456 443 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC012640.5-201ENST00000623897 319 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC243829.7-201ENST00000633081 225 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SCXQ7RTU7 AC010329.5-201ENST00000623497 2174 ntBASIC1.69□□□□□ -2.14
SCXQ7RTU7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SCXQ7RTU7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SCXQ7RTU7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SCXQ7RTU7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 SNORD62.1-201ENST00000362541 86 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 RNU6-884P-201ENST00000363889 107 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 RNU6-750P-201ENST00000390946 107 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 RNU6-516P-201ENST00000411381 104 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AL953862.1-201ENST00000423016 168 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC112220.1-201ENST00000434628 355 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 RPL35AP22-201ENST00000436855 335 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 RPL23AP76-201ENST00000441860 458 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 RPL7P36-201ENST00000444633 681 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SCXQ7RTU7 SRIP1-201ENST00000489235 288 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 RNA5SP148-201ENST00000516527 94 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC010376.1-201ENST00000522101 334 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC118942.1-201ENST00000529674 1035 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AL512347.1-201ENST00000566420 503 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 MIR5694-201ENST00000581190 76 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 MIR4635-201ENST00000583759 79 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC021749.1-201ENST00000604322 607 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC239868.4-201ENST00000608318 671 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AL121895.2-201ENST00000619558 447 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC019226.1-201ENST00000625666 515 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 LINC02211-204ENST00000642024 1070 ntBASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.68□□□□□ -2.14
SCXQ7RTU7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SCXQ7RTU7 AC004520.1-201ENST00000608362 1413 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SCXQ7RTU7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SCXQ7RTU7 RNU1-39P-201ENST00000383897 165 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 RNU6-114P-201ENST00000384704 105 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 RPL23AP29-201ENST00000397284 453 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 RSL24D1P4-201ENST00000400938 484 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 AL356421.1-201ENST00000403255 413 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 TXNP7-201ENST00000406296 293 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SCXQ7RTU7 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.67□□□□□ -2.14
SCXQ7RTU7 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.67□□□□□ -2.14
SCXQ7RTU7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.67□□□□□ -2.14
SCXQ7RTU7 USP9YP13-201ENST00000417797 480 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 MORF4L1P6-201ENST00000418771 268 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.67□□□□□ -2.14
SCXQ7RTU7 HMGB1P9-201ENST00000429856 646 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.67□□□□□ -2.14
SCXQ7RTU7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.67□□□□□ -2.14
SCXQ7RTU7 COX7BP2-201ENST00000437976 242 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.67□□□□□ -2.14
SCXQ7RTU7 OSTCP8-201ENST00000445117 448 ntBASIC1.67□□□□□ -2.14
SCXQ7RTU7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms