Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 HSPE1P11-201ENST00000339579 310 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RN7SKP226-201ENST00000364912 300 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 SNORA23-201ENST00000365128 182 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AL359634.1-202ENST00000404721 284 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RNU6-195P-201ENST00000411352 109 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RPL32P35-201ENST00000415214 394 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC137499.1-201ENST00000427602 88 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC133104.1-201ENST00000429100 218 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC005326.1-201ENST00000429197 123 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 MTND3P21-201ENST00000433774 331 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RPL23AP31-201ENST00000456160 467 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC008481.1-201ENST00000463278 396 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RPL21P104-201ENST00000464143 478 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RPS27AP1-201ENST00000475545 471 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RPS15AP36-201ENST00000492022 382 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AL358832.1-201ENST00000497800 389 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 SNORA31.8-201ENST00000516327 108 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 MIR3944-201ENST00000581277 108 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC105224.1-201ENST00000587055 421 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AL022154.1-201ENST00000604698 785 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AC069200.1-201ENST00000609511 323 ntBASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SYNE3Q6ZMZ3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 SNORA63.1-201ENST00000362493 131 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 RNU6-600P-201ENST00000362524 99 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 RNVU1-14-201ENST00000384770 164 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AL357075.1-201ENST00000404107 726 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 Y_RNA.599-201ENST00000410489 109 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 RNA5SP120-201ENST00000410900 112 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 RPL21P66-201ENST00000426566 466 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 ISCA1P6-201ENST00000427740 390 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC005300.1-201ENST00000428401 373 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 RPL31P35-201ENST00000431058 377 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 ARPC3P1-201ENST00000437218 533 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC125238.1-201ENST00000448842 249 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 ELOCP23-201ENST00000452014 332 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC034236.1-201ENST00000469891 373 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 VN1R17P-201ENST00000472048 1090 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC012181.1-201ENST00000479895 423 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC108860.1-201ENST00000484521 383 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 HMGB3P15-201ENST00000507326 574 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC004062.1-201ENST00000509926 645 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 RNA5SP217-201ENST00000515959 91 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC011979.2-201ENST00000527568 352 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 SYF2P1-201ENST00000550658 413 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 BDH2P1-201ENST00000602288 736 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC024220.1-201ENST00000603675 484 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AP000860.1-201ENST00000605250 559 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC004492.1-201ENST00000607036 742 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 SNHG22-203ENST00000617833 660 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC099654.12-201ENST00000639868 649 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 AC005832.2-201ENST00000538921 1430 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 MTND4P5-201ENST00000435821 1374 ntBASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SYNE3Q6ZMZ3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 DEFB108F-201ENST00000344638 222 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RNU6-169P-201ENST00000365336 107 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RNU6-108P-201ENST00000365558 107 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RNU4-47P-201ENST00000410876 114 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RPL21P24-201ENST00000413752 448 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 UBE2FP1-201ENST00000416536 447 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RPS15AP12-201ENST00000419498 388 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AL451062.2-201ENST00000427515 271 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC104651.1-201ENST00000427559 735 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC119618.1-201ENST00000434191 222 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 RPL23AP22-201ENST00000437556 453 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 MTND1P1-201ENST00000445453 368 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC132479.1-201ENST00000449160 144 ntBASIC3.74□□□□□ -1.81
SYNE3Q6ZMZ3 AC140076.1-201ENST00000449897 361 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms