Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AL442663.2-201ENST00000554385 511 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 MIR4644-201ENST00000579929 84 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 MIR4742-201ENST00000581069 85 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AP001029.3-201ENST00000588063 596 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AC034229.5-201ENST00000624258 185 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AL645937.1-201ENST00000641739 1652 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 AC090337.1-201ENST00000579651 2074 ntBASIC3.48□□□□□ -1.85
ZNF549Q6P9A3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AL136964.1-201ENST00000622038 2990 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AL139276.1-201ENST00000311910 1001 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RNU6-511P-201ENST00000363496 107 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 MIR558-201ENST00000384920 94 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 MIR134-201ENST00000385258 73 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RN7SKP27-201ENST00000410684 333 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RAB9AP3-201ENST00000412737 573 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 SYF2P2-201ENST00000417620 583 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AF228730.4-201ENST00000421457 183 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AC018630.2-202ENST00000422992 927 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 DUTP6-201ENST00000425573 462 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 OR4K11P-201ENST00000431829 904 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 MTATP6P16-201ENST00000434543 526 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RAC1P7-201ENST00000445367 377 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RAB9AP1-201ENST00000449393 573 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 PPIAP3-201ENST00000450588 505 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 MTND3P16-201ENST00000452205 344 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 U3.44-201ENST00000458938 192 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RNU6-329P-201ENST00000459618 107 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 HMGN1P11-201ENST00000508668 303 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 SNORA19.2-201ENST00000516013 114 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RNU1-95P-201ENST00000516357 160 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RNU1-128P-201ENST00000516704 160 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RN7SKP219-201ENST00000516825 296 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 BTF3P12-201ENST00000519620 469 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AC022690.1-201ENST00000526681 550 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 OR4K8P-201ENST00000578842 1048 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 MIR1254-2-201ENST00000579553 63 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AC243960.4-201ENST00000600532 288 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AC010591.1-201ENST00000603941 649 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AC025588.3-201ENST00000604182 274 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RNU6-89P-201ENST00000606519 100 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RMST_8.1-201ENST00000610287 165 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 uc_338.5-201ENST00000611839 155 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 RMST_7.1-201ENST00000621935 268 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AP003355.3-201ENST00000623465 114 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 ZNF285B-201ENST00000561698 1767 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 ZNF33CP-201ENST00000432492 2030 ntBASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ZNF549Q6P9A3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.46□□□□□ -1.85
ZNF549Q6P9A3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
ZNF549Q6P9A3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
ZNF549Q6P9A3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 MIR30E-201ENST00000362104 92 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 SNORA63-201ENST00000363450 132 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 MIR454-201ENST00000390180 115 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 RNU2-15P-201ENST00000410692 191 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.615-201ENST00000410769 117 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 RNU6-193P-201ENST00000410977 107 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 USP9YP20-201ENST00000419224 558 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 SAR1AP4-201ENST00000429225 591 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 ATP5JP1-201ENST00000431631 322 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.46□□□□□ -1.86
ZNF549Q6P9A3 AL357552.1-201ENST00000445254 415 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms