Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RNU6-1081P-201ENST00000384537 107 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AL162739.1-201ENST00000450606 307 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC108145.1-201ENST00000503770 153 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 Y_RNA.683-201ENST00000516508 93 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC025755.1-201ENST00000521306 278 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AP005403.1-201ENST00000579720 229 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AL645944.1-201ENST00000603857 493 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 OR51H2P-202ENST00000641424 3046 ntBASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.68□□□□□ -1.5
PRPF38BQ5VTL8 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 Y_RNA.245-201ENST00000364493 95 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 PTMAP2-201ENST00000397627 327 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC007560.1-201ENST00000426912 237 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 U8.22-201ENST00000459141 133 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 TOMM22P6-201ENST00000465035 409 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 RN7SL132P-201ENST00000478131 296 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 RN7SL319P-201ENST00000480656 221 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 RNU1-45P-201ENST00000517191 141 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC107918.3-201ENST00000533272 382 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AP001880.2-201ENST00000538233 448 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC005476.1-201ENST00000554427 397 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 MIR4659A-201ENST00000580269 81 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 AC011476.5-201ENST00000615594 130 ntBASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF38BQ5VTL8 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 SNORA66-201ENST00000384792 133 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 COX6CP10-201ENST00000416832 224 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 AC015977.1-201ENST00000418887 292 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 RPL23AP24-201ENST00000458203 385 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 RPS29P27-201ENST00000463711 170 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 AL160314.1-201ENST00000490836 438 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 SNORA74D-201ENST00000516404 141 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 RNA5SP290-201ENST00000517133 127 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 AC138965.3-201ENST00000623875 498 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 AC090617.7-201ENST00000623952 126 ntBASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF38BQ5VTL8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 RNU6-740P-201ENST00000364734 105 ntBASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 RNU6-290P-201ENST00000365212 101 ntBASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 GNG5P2-201ENST00000372054 207 ntBASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 RPS26P8-201ENST00000393490 348 ntBASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.65□□□□□ -1.5
PRPF38BQ5VTL8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms