Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RNF220Q5VTB9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC022336.2-201ENST00000568966 2538 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 ASNSP3-201ENST00000451989 1306 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 SNORA4.3-201ENST00000365564 137 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 RNU6-140P-201ENST00000384566 108 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 RNU6-193P-201ENST00000410977 107 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC012498.1-201ENST00000424037 437 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 ZNF863P-201ENST00000426746 417 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL590664.1-201ENST00000448065 339 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 SSXP4-201ENST00000451349 245 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 CECR9-201ENST00000453421 199 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 ANP32BP2-201ENST00000454525 545 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 RPL29P14-201ENST00000495837 428 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 RNU4-29P-201ENST00000515943 174 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 RNU7-143P-201ENST00000516781 65 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 SUB1P1-201ENST00000524415 382 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL137161.1-201ENST00000532231 390 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 HMGB1P14-201ENST00000557424 591 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL138976.2-201ENST00000563989 694 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC234778.2-201ENST00000566241 354 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC008962.1-201ENST00000605729 304 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 MIR7151-201ENST00000617477 60 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 AL359693.1-201ENST00000614959 2407 ntBASIC3.79□□□□□ -1.8
RNF220Q5VTB9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RNF220Q5VTB9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RNU6-1283P-201ENST00000365314 105 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RNU6-217P-201ENST00000384164 104 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RPL21P17-201ENST00000397467 475 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AL391417.1-201ENST00000404100 426 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 OR9R1P-201ENST00000412200 877 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 KCTD9P3-201ENST00000434597 1169 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 HMGB3P11-201ENST00000440127 604 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AC006011.1-201ENST00000442758 349 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RNU7-180P-201ENST00000459240 63 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RPL7P19-201ENST00000469948 618 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RPL23AP11-201ENST00000475260 469 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RPS29P25-201ENST00000481709 171 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RN7SL271P-201ENST00000487601 295 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RPL38P4-201ENST00000502376 214 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 UBE2CP3-201ENST00000502715 450 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 SUMO2P6-201ENST00000505273 288 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AC108475.1-201ENST00000507880 950 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AC006445.2-201ENST00000510061 472 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 RN7SKP83-201ENST00000516512 178 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 MIR5684-201ENST00000585074 65 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 MIR3662-201ENST00000637030 95 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AC024614.3-201ENST00000637860 256 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 AP001148.1-201ENST00000624124 2359 ntBASIC3.78□□□□□ -1.8
RNF220Q5VTB9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.78□□□□□ -1.8
RNF220Q5VTB9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 ZNF285B-201ENST00000561698 1767 ntBASIC3.77□□□□□ -1.81
RNF220Q5VTB9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF220Q5VTB9 SNORA60-201ENST00000362396 134 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 300 ms