Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL591516.1-201ENST00000611326 274 ntBASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 AC103858.2-201ENST00000621471 543 ntBASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 AL596275.2-204ENST00000641628 552 ntBASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 AL596275.2-206ENST00000641957 626 ntBASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL13A1Q5TAT6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 Y_RNA.117-201ENST00000363294 101 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AP000580.1-201ENST00000404439 358 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 RNA5SP56-201ENST00000410277 118 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 RBMY1KP-201ENST00000423480 476 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AL133396.1-201ENST00000432048 687 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AL451050.1-201ENST00000450126 415 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 RPL23AP31-201ENST00000456160 467 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AC105758.1-201ENST00000506038 399 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AC022790.1-201ENST00000522872 204 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 MIR4716-201ENST00000579628 84 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 MIR5188-201ENST00000583467 113 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 ELOCP5-201ENST00000604924 333 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 MTND4LP5-201ENST00000605152 292 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AC007619.2-201ENST00000605743 379 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AC098479.1-201ENST00000609225 154 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 AL359955.1-201ENST00000455242 3275 ntBASIC5.17□□□□□ -1.58
COL13A1Q5TAT6 BTBD10P1-201ENST00000549824 1352 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 AC138907.8-201ENST00000623981 2256 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 MIR331-201ENST00000362302 94 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 Y_RNA.151-201ENST00000363566 112 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 SNORA20.1-201ENST00000364790 130 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 Y_RNA.478-201ENST00000384358 107 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 RNU6-1156P-201ENST00000410365 100 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 RNU6-174P-201ENST00000410406 106 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 AC092447.6-201ENST00000414578 210 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 AC092809.3-201ENST00000415453 231 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 RPL21P41-201ENST00000459863 264 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 RN7SL293P-201ENST00000481765 281 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 RN7SKP258-201ENST00000517151 304 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 HMGB3P26-201ENST00000560051 582 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 MIR4512-201ENST00000583257 77 ntBASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL13A1Q5TAT6 AC016588.2-201ENST00000632484 3021 ntBASIC5.15□□□□□ -1.58
COL13A1Q5TAT6 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
COL13A1Q5TAT6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL13A1Q5TAT6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL13A1Q5TAT6 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
COL13A1Q5TAT6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL13A1Q5TAT6 AC138393.1-203ENST00000327086 343 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.14-201ENST00000362415 103 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RN7SKP185-201ENST00000362813 326 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RNU6-371P-201ENST00000364283 108 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RNU4-42P-201ENST00000364738 142 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 SNORA5A-201ENST00000384111 134 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RNU6-146P-201ENST00000384602 108 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RNU6-14P-201ENST00000384630 106 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.562-201ENST00000384695 113 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 Z98745.1-201ENST00000402553 494 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RPS26P47-201ENST00000427219 348 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 AC073063.1-201ENST00000434352 607 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms