Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TTC39AQ5SRH9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 RPL7P26-201ENST00000333817 754 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 RNY4P16-201ENST00000364768 94 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 RNU6-282P-201ENST00000365357 103 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 RNU6-114P-201ENST00000384704 105 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 SNORD67-201ENST00000390833 111 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 U3.20-201ENST00000390909 217 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 RPL23AP32-201ENST00000395315 459 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL590002.1-201ENST00000406554 418 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 RNA5SP107-201ENST00000411358 122 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 PIGFP2-201ENST00000421400 651 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL353572.1-201ENST00000442490 417 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC016696.1-201ENST00000446949 318 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 RN7SL442P-201ENST00000473804 320 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC055855.1-201ENST00000489563 579 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC010587.1-201ENST00000505809 469 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC008885.1-201ENST00000514930 301 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 SYF2P1-201ENST00000550658 413 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC005000.2-201ENST00000605468 310 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL591516.1-201ENST00000611326 274 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC073534.2-201ENST00000620377 381 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AL359880.1-201ENST00000621879 266 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AC073476.4-201ENST00000628409 72 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 AP001350.1-201ENST00000601906 1524 ntBASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TTC39AQ5SRH9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 Y_RNA.256-201ENST00000364594 104 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 Y_RNA.604-201ENST00000410574 102 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 RNU2-47P-201ENST00000410649 186 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 RNU4-78P-201ENST00000410940 126 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 AC006548.1-201ENST00000427470 102 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 MTND1P2-201ENST00000430604 821 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 MTCO2P11-201ENST00000431069 680 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 EZH2P1-201ENST00000431167 291 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 MTATP6P23-201ENST00000440153 476 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 USP9YP15-201ENST00000442391 422 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 AL359385.1-201ENST00000456509 365 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 RPL27AP5-201ENST00000469428 449 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 HMGB3P15-201ENST00000507326 574 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 AC009646.1-201ENST00000510455 318 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 MIR3186-201ENST00000577404 85 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 AP002360.4-201ENST00000606980 481 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 AL590282.1-201ENST00000610379 1136 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 CR381572.1-201ENST00000625098 102 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 MIR622-201ENST00000638396 96 ntBASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TTC39AQ5SRH9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 RNU4-1-201ENST00000363925 141 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC110754.1-201ENST00000399740 601 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC022028.1-201ENST00000412054 408 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC092447.6-201ENST00000414578 210 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 MTND3P17-201ENST00000416968 344 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 RPS15AP12-201ENST00000419498 388 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC133104.1-201ENST00000429100 218 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC073464.1-201ENST00000429823 534 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 UBE2V1P13-201ENST00000436983 439 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 FTH1P1-201ENST00000437933 532 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 FGF7P6-202ENST00000451282 293 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 RPL23AP14-201ENST00000468281 468 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 HMGB1P29-201ENST00000505659 499 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC017037.2-201ENST00000513850 890 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 RNU1-143P-201ENST00000516296 146 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 Vault.3-201ENST00000516676 95 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 RNU6-1220P-201ENST00000517126 108 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC104027.1-201ENST00000521887 300 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AK6P1-201ENST00000540219 478 ntBASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.78□□□□□ -1.8
TTC39AQ5SRH9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms