Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AL451142.2-201ENST00000429076 2090 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-1175P-201ENST00000365200 107 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-741P-201ENST00000383889 107 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-17P-201ENST00000384245 107 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RNU1-106P-201ENST00000384382 164 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 SNORA67-201ENST00000384423 137 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-843P-201ENST00000384454 104 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-18P-201ENST00000384527 107 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RPL11P3-201ENST00000395256 523 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RPS12P23-201ENST00000419579 400 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 RPL30P3-201ENST00000424262 333 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AL358472.1-201ENST00000431295 329 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AL589765.3-201ENST00000446084 462 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 snoU13.29-201ENST00000459370 104 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 SCARNA16.4-201ENST00000516956 187 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AP004607.2-201ENST00000533949 322 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 OR4H12P-201ENST00000556269 907 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 KLKP1-201ENST00000595979 403 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC011603.4-201ENST00000611325 277 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC116447.1-201ENST00000613153 453 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC139769.1-204ENST00000472297 1931 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 AC007938.2-201ENST00000604666 2634 ntBASIC4.93□□□□□ -1.62
RNFT1Q5M7Z0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AC138907.8-201ENST00000623981 2256 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNU1-43P-201ENST00000365052 165 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNA5SP213-201ENST00000391031 106 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNU1-139P-201ENST00000391307 165 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNU2-21P-201ENST00000410368 188 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNA5SP296-201ENST00000410523 111 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 PSMD10P3-201ENST00000437000 448 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RPL12P18-201ENST00000437175 325 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 MTATP6P7-201ENST00000453315 681 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RPL23AP45-201ENST00000476406 468 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AC107027.2-201ENST00000512197 115 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AL671862.1-201ENST00000515851 349 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNA5SP76-201ENST00000516277 87 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-347P-201ENST00000516658 105 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-567P-201ENST00000516746 107 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AC069307.1-201ENST00000602820 447 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 AL450326.2-201ENST00000421913 1962 ntBASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNFT1Q5M7Z0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 FTLP6-201ENST00000355274 422 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-199P-201ENST00000362954 107 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 Y_RNA.172-201ENST00000363765 102 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 RNU6-20P-201ENST00000384106 107 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 SNORA68.2-201ENST00000391263 128 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 RN7SKP213-201ENST00000410746 298 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 AL133482.1-201ENST00000415988 498 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 RPS20P1-201ENST00000434853 354 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 AZGP1P2-201ENST00000454506 345 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 AL389915.2-201ENST00000454576 441 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 RPS5P7-201ENST00000456664 608 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 RN7SL188P-201ENST00000469842 285 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 RPL7AP6-201ENST00000477943 801 ntBASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.91□□□□□ -1.62
RNFT1Q5M7Z0 AK3P2-201ENST00000507976 429 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms