Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC007490.1-201ENST00000624321 703 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 AC008993.2-201ENST00000631744 806 ntBASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SHROOM1Q2M3G4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC009812.4-201ENST00000569134 1805 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-433P-201ENST00000363216 104 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-853P-201ENST00000364306 107 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-723P-201ENST00000383973 107 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-114P-201ENST00000384704 105 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AL022400.1-201ENST00000423946 935 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 MTND1P20-201ENST00000430341 950 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 FCF1P1-201ENST00000432690 571 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AL354941.1-201ENST00000438600 464 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 MTCO1P27-201ENST00000448269 226 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 USP9YP10-201ENST00000454868 628 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 OR6K1P-201ENST00000456766 971 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC087588.1-201ENST00000462203 316 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC109464.2-201ENST00000510242 943 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 RN7SKP287-201ENST00000516546 266 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC005498.1-201ENST00000592125 465 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AL391001.1-201ENST00000602747 715 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AL355816.2-201ENST00000610049 647 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC021755.4-201ENST00000616620 456 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC002550.2-201ENST00000621246 394 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC064859.1-201ENST00000624741 174 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 MTND4P16-201ENST00000466108 1367 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 DDX43P2-201ENST00000604753 1354 ntBASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.98□□□□□ -1.93
SHROOM1Q2M3G4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC011477.1-204ENST00000623416 1325 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 RPL21P132-201ENST00000331267 462 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-931P-201ENST00000363850 107 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 SNORA36C-201ENST00000384289 132 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 RNU6-253P-201ENST00000384730 105 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MIR27B-201ENST00000385129 97 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 NPM1P11-201ENST00000417106 855 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 CCDC58P2-201ENST00000417131 366 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AL358075.3-201ENST00000426289 226 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC092427.1-202ENST00000430569 476 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 RPL39P40-201ENST00000445481 146 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AL109741.2-201ENST00000455561 343 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 RPL31P60-201ENST00000478450 367 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MTCYBP35-201ENST00000503630 1137 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 LTV1P1-201ENST00000510683 1237 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MTND5P4-201ENST00000514978 288 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 SNORA9.3-201ENST00000516383 129 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 RNA5SP24-201ENST00000516478 95 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC023050.2-201ENST00000544968 387 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 ELOCP32-201ENST00000548625 324 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MIR3616-201ENST00000584070 92 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC105224.1-201ENST00000587055 421 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 BNIP3P23-201ENST00000599655 511 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC097468.3-201ENST00000607956 456 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC024560.3-201ENST00000608482 349 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 MIR6715A-201ENST00000615929 79 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AL449363.1-201ENST00000617815 186 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 Z99129.2-201ENST00000619967 314 ntBASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHROOM1Q2M3G4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AC135776.4-201ENST00000624300 1904 ntBASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
SHROOM1Q2M3G4 RNU6-462P-201ENST00000362659 105 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms