Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC006077.1-201ENST00000604746 343 ntBASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 AC244107.2-201ENST00000611773 76 ntBASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 AC114781.5-201ENST00000615297 108 ntBASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 AL591926.4-201ENST00000616895 298 ntBASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 RNA5SP196-201ENST00000625967 102 ntBASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 AC008568.2-201ENST00000623862 2313 ntBASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO4Q2I0M5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 RNU6-818P-201ENST00000364837 108 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 SNORA70.6-201ENST00000383934 134 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 SNORD63-201ENST00000384262 68 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 RPS15AP6-201ENST00000420703 385 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 MTATP6P4-201ENST00000427725 675 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 NDUFB4P8-201ENST00000435351 367 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 FHP1-201ENST00000442741 703 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 RPS26P56-201ENST00000444468 240 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 RPL23AP56-201ENST00000460778 453 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC133134.1-201ENST00000466800 359 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 RN7SL132P-201ENST00000478131 296 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 HMGB1P21-201ENST00000502313 581 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC006499.6-201ENST00000511169 607 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC108471.1-201ENST00000513977 287 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC016065.2-201ENST00000514530 444 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 RNU1-45P-201ENST00000517191 141 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC025755.1-201ENST00000521306 278 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 MIR3684-201ENST00000579779 74 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 AC007998.5-201ENST00000622938 237 ntBASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO4Q2I0M5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 MTND5P9-201ENST00000503854 1755 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AP002512.4-202ENST00000641599 4530 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 RNA5SP453-201ENST00000362503 119 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 SNORA73.1-201ENST00000363107 205 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 RNU1-74P-201ENST00000384108 171 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 RNA5SP397-201ENST00000391323 118 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 RPL7AP25-201ENST00000423357 805 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AC092573.2-201ENST00000434546 243 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 RPS5P7-201ENST00000456664 608 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 RNU6-1234P-201ENST00000516877 103 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 BRDTP1-201ENST00000605735 677 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 FAM27B-201ENST00000610601 213 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 SNHG22-203ENST00000617833 660 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 Y_RNA.778-201ENST00000620203 90 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 AL445487.1-201ENST00000415694 1580 ntBASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RSPO4Q2I0M5 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.77□□□□□ -1.65
RSPO4Q2I0M5 BCORP1-203ENST00000513194 5093 ntBASIC4.77□□□□□ -1.65
RSPO4Q2I0M5 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.77□□□□□ -1.65
RSPO4Q2I0M5 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RSPO4Q2I0M5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms