Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SF3B3Q15393 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SF3B3Q15393 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SF3B3Q15393 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.2□□□□□ -1.74
SF3B3Q15393 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SF3B3Q15393 Y_RNA.72-201ENST00000362894 103 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 Y_RNA.111-201ENST00000363248 100 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 RNU6-1097P-201ENST00000363586 107 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 RNU6-359P-201ENST00000365466 108 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SF3B3Q15393 RNU6-1158P-201ENST00000391167 107 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 OR9R1P-201ENST00000412200 877 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.2□□□□□ -1.74
SF3B3Q15393 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.2□□□□□ -1.74
SF3B3Q15393 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.2□□□□□ -1.74
SF3B3Q15393 AC127537.2-201ENST00000439258 465 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 AC093019.1-201ENST00000443135 252 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 RPL7P52-201ENST00000449200 742 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 snoU13.8-201ENST00000458890 104 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 RNU6-261P-201ENST00000459506 102 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 RPL23AP62-201ENST00000463396 453 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.2□□□□□ -1.74
SF3B3Q15393 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.2□□□□□ -1.74
SF3B3Q15393 AC110794.1-201ENST00000505816 425 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.2□□□□□ -1.74
SF3B3Q15393 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.2□□□□□ -1.74
SF3B3Q15393 RNA5SP337-201ENST00000517007 109 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.2□□□□□ -1.74
SF3B3Q15393 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SF3B3Q15393 AC005476.1-201ENST00000554427 397 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 MIR4325-201ENST00000583049 90 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 AC020914.4-201ENST00000597690 277 ntBASIC4.2□□□□□ -1.74
SF3B3Q15393 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
SF3B3Q15393 FAM35DP-201ENST00000323387 2712 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 SNORD82-201ENST00000365530 70 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 SNORA69-201ENST00000383895 132 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 MIR634-201ENST00000385208 97 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.19□□□□□ -1.74
SF3B3Q15393 PSMA2P3-201ENST00000429685 675 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 EZH2P1-201ENST00000431167 291 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 GPR143P-201ENST00000434155 205 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AC016691.1-201ENST00000441321 413 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.19□□□□□ -1.74
SF3B3Q15393 BX276092.4-201ENST00000452056 248 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.19□□□□□ -1.74
SF3B3Q15393 RN7SL93P-201ENST00000463035 293 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC021382.1-201ENST00000483523 359 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
SF3B3Q15393 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.19□□□□□ -1.74
SF3B3Q15393 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.19□□□□□ -1.74
SF3B3Q15393 SNORA40.12-201ENST00000516329 111 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AP003497.1-201ENST00000528472 562 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.19□□□□□ -1.74
SF3B3Q15393 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.19□□□□□ -1.74
SF3B3Q15393 SETP2-201ENST00000553886 926 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 ANP32BP3-201ENST00000559213 706 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 ZNF192P1-203ENST00000565888 810 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC106782.4-201ENST00000568264 210 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC007038.2-201ENST00000608095 740 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC009233.1-201ENST00000616477 371 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC024940.5-201ENST00000622889 474 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 AC048347.1-201ENST00000624621 427 ntBASIC4.19□□□□□ -1.74
SF3B3Q15393 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SF3B3Q15393 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.19□□□□□ -1.74
SF3B3Q15393 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SF3B3Q15393 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SF3B3Q15393 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SF3B3Q15393 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
SF3B3Q15393 TNPO1P3-201ENST00000436471 2662 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 NCAPGP1-201ENST00000505112 1814 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 ZNF680P1-201ENST00000436625 1469 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SF3B3Q15393 RNA5SP197-201ENST00000363357 119 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 RNU6-97P-201ENST00000363387 104 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 XGY1-201ENST00000381172 446 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SF3B3Q15393 U3.20-201ENST00000390909 217 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SF3B3Q15393 AL138878.1-201ENST00000405131 347 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 RNU4-47P-201ENST00000410876 114 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 RPL31P2-201ENST00000413849 377 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 RPS15AP12-201ENST00000419498 388 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 ELOCP4-201ENST00000420090 333 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 RPL23AP30-201ENST00000432419 501 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 AC006028.1-201ENST00000438379 402 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 AF228730.2-201ENST00000438784 848 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.18□□□□□ -1.74
SF3B3Q15393 AC104308.1-201ENST00000454621 333 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 S100A11P2-201ENST00000467589 312 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 NIPA2P2-201ENST00000496376 1083 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 TMEM248P1-201ENST00000510579 951 ntBASIC4.18□□□□□ -1.74
SF3B3Q15393 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms