Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MTATP6P4-201ENST00000427725 675 ntBASIC1.75□□□□□ -2.13
HMGXB3Q12766 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGXB3Q12766 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGXB3Q12766 AC092989.1-201ENST00000481235 277 ntBASIC1.75□□□□□ -2.13
HMGXB3Q12766 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.75□□□□□ -2.13
HMGXB3Q12766 MTCYBP41-201ENST00000528913 1123 ntBASIC1.75□□□□□ -2.13
HMGXB3Q12766 AL133507.1-201ENST00000605269 557 ntBASIC1.75□□□□□ -2.13
HMGXB3Q12766 MIR4496-201ENST00000635896 61 ntBASIC1.75□□□□□ -2.13
HMGXB3Q12766 AP001350.1-201ENST00000601906 1524 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 Y_RNA.85-201ENST00000363014 111 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 OR51A5P-201ENST00000415429 942 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 HMGN2P30-201ENST00000423237 256 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 CBX3P6-201ENST00000430257 527 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 AL596276.1-201ENST00000434465 418 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 AC015922.2-201ENST00000435593 184 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 SDCBPP1-201ENST00000440192 890 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.74□□□□□ -2.13
HMGXB3Q12766 AC114322.1-201ENST00000506771 926 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGXB3Q12766 AC110792.2-201ENST00000510278 224 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGXB3Q12766 RNA5SP468-201ENST00000516782 93 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 RNU6-1073P-201ENST00000517182 106 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGXB3Q12766 AC025423.2-201ENST00000537570 439 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.74□□□□□ -2.13
HMGXB3Q12766 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMGXB3Q12766 AC105245.1-201ENST00000581934 244 ntBASIC1.74□□□□□ -2.13
HMGXB3Q12766 RNU6-50P-201ENST00000362356 103 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 RN7SKP200-201ENST00000410564 320 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 ZNF90P2-204ENST00000419323 1075 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGXB3Q12766 NEFMP1-201ENST00000443423 1006 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMGXB3Q12766 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.73□□□□□ -2.13
HMGXB3Q12766 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGXB3Q12766 AC092140.2-201ENST00000618027 521 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 AL109933.3-201ENST00000619095 188 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 MTND4P27-201ENST00000450813 1354 ntBASIC1.73□□□□□ -2.13
HMGXB3Q12766 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMGXB3Q12766 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.72□□□□□ -2.13
HMGXB3Q12766 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGXB3Q12766 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGXB3Q12766 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HMGXB3Q12766 AL513343.1-201ENST00000451818 792 ntBASIC1.72□□□□□ -2.13
HMGXB3Q12766 AL139109.1-201ENST00000455491 297 ntBASIC1.72□□□□□ -2.13
HMGXB3Q12766 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGXB3Q12766 SNORA31.20-201ENST00000517111 133 ntBASIC1.72□□□□□ -2.13
HMGXB3Q12766 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.72□□□□□ -2.13
HMGXB3Q12766 NIFKP8-201ENST00000560500 874 ntBASIC1.72□□□□□ -2.13
HMGXB3Q12766 U73023.1-201ENST00000603134 700 ntBASIC1.72□□□□□ -2.13
HMGXB3Q12766 AL391834.1-201ENST00000609609 560 ntBASIC1.72□□□□□ -2.13
HMGXB3Q12766 AC009090.3-201ENST00000616553 565 ntBASIC1.72□□□□□ -2.13
HMGXB3Q12766 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMGXB3Q12766 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.13
HMGXB3Q12766 MIR513A1-201ENST00000385138 129 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC004941.2-201ENST00000427009 228 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.71□□□□□ -2.14
HMGXB3Q12766 RNU7-27P-201ENST00000459281 62 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AP002371.1-201ENST00000463604 433 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 HMGB1P38-201ENST00000490557 577 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGXB3Q12766 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AL512605.2-201ENST00000592972 256 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AL590095.2-201ENST00000604136 117 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC113194.1-201ENST00000606037 500 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 RNU6-335P-201ENST00000364563 113 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 Y_RNA.471-201ENST00000384312 102 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 RNA5SP498-201ENST00000411342 120 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 MTND4P11-201ENST00000417020 1058 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC233728.2-201ENST00000425348 757 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 TPMTP4-201ENST00000450749 678 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 LARP7P4-201ENST00000481075 878 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC083923.1-201ENST00000523708 376 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC109635.4-202ENST00000531666 412 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.71□□□□□ -2.14
HMGXB3Q12766 RPS15AP11-201ENST00000594193 385 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 AC007742.2-201ENST00000618226 398 ntBASIC1.71□□□□□ -2.14
HMGXB3Q12766 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.7□□□□□ -2.14
HMGXB3Q12766 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.7□□□□□ -2.14
HMGXB3Q12766 RNU6-198P-201ENST00000384258 104 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 MIR320B1-201ENST00000390209 79 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 RPS20P15-201ENST00000412792 311 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 AP000949.1-201ENST00000438328 629 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 AL353718.1-201ENST00000451028 517 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 AC234775.1-201ENST00000454247 670 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 AC105313.1-201ENST00000509121 353 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 CASP1P1-201ENST00000526345 212 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.7□□□□□ -2.14
HMGXB3Q12766 OSBPL9P3-201ENST00000534523 595 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 UBE2L4-201ENST00000587688 464 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 AC090970.3-201ENST00000612566 866 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 AC099654.7-201ENST00000635788 2127 ntBASIC1.7□□□□□ -2.14
HMGXB3Q12766 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
HMGXB3Q12766 Y_RNA.258-201ENST00000364613 105 ntBASIC1.69□□□□□ -2.14
HMGXB3Q12766 RNU6-1181P-201ENST00000384191 106 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms