Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL159153.1-201ENST00000619688 317 ntBASIC4.84□□□□□ -1.63
SOX4Q06945 AC130454.1-201ENST00000622948 401 ntBASIC4.84□□□□□ -1.63
SOX4Q06945 MIR6830-201ENST00000636015 70 ntBASIC4.84□□□□□ -1.63
SOX4Q06945 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SOX4Q06945 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SOX4Q06945 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SOX4Q06945 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SOX4Q06945 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SOX4Q06945 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SOX4Q06945 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SOX4Q06945 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX4Q06945 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX4Q06945 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX4Q06945 MIR625-201ENST00000385047 85 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 AL445529.1-201ENST00000398713 389 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 AL030996.1-201ENST00000411430 235 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 RAC1P3-201ENST00000416129 580 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 Z74021.1-201ENST00000423610 407 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 RPS29P17-201ENST00000430795 166 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 AC073063.1-201ENST00000434352 607 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX4Q06945 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX4Q06945 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX4Q06945 DAP3P1-201ENST00000441522 278 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 TRBVB-201ENST00000477100 408 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX4Q06945 HIGD1AP3-201ENST00000515857 278 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 AP003733.2-201ENST00000529409 171 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX4Q06945 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SOX4Q06945 MIR5692A1-201ENST00000580523 69 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 MIR4472-2-201ENST00000582069 67 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.83□□□□□ -1.64
SOX4Q06945 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX4Q06945 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX4Q06945 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SOX4Q06945 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.83□□□□□ -1.64
SOX4Q06945 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SOX4Q06945 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SOX4Q06945 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.83□□□□□ -1.64
SOX4Q06945 AL672167.1-203ENST00000641299 2975 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 AC107068.1-201ENST00000563286 4218 ntBASIC4.83□□□□□ -1.64
SOX4Q06945 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SOX4Q06945 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 RNA5SP151-201ENST00000365632 117 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 MIR135A2-201ENST00000384854 100 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AL137014.1-201ENST00000420490 1226 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX4Q06945 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX4Q06945 AL392103.1-201ENST00000447000 198 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX4Q06945 PRELID3BP1-201ENST00000457142 540 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX4Q06945 AC015795.1-201ENST00000513669 327 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.82□□□□□ -1.64
SOX4Q06945 AC144568.1-201ENST00000520139 137 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AC022080.3-201ENST00000544433 482 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX4Q06945 AC023575.1-201ENST00000580510 358 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 MIR3138-201ENST00000585238 82 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AC114781.5-201ENST00000615297 108 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 AL031601.2-202ENST00000622650 282 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX4Q06945 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX4Q06945 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SOX4Q06945 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SOX4Q06945 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.82□□□□□ -1.64
SOX4Q06945 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.82□□□□□ -1.64
SOX4Q06945 EOGT-210ENST00000615922 1931 ntBASIC4.82□□□□□ -1.64
SOX4Q06945 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX4Q06945 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX4Q06945 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX4Q06945 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX4Q06945 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SOX4Q06945 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SOX4Q06945 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX4Q06945 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX4Q06945 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SOX4Q06945 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX4Q06945 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SOX4Q06945 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX4Q06945 Y_RNA.20-201ENST00000362479 113 ntBASIC4.81□□□□□ -1.64
SOX4Q06945 RN7SKP224-201ENST00000364140 325 ntBASIC4.81□□□□□ -1.64
SOX4Q06945 SNORA70.2-201ENST00000364506 135 ntBASIC4.81□□□□□ -1.64
SOX4Q06945 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX4Q06945 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX4Q06945 BX842559.1-201ENST00000419615 532 ntBASIC4.81□□□□□ -1.64
SOX4Q06945 AC004866.2-201ENST00000438285 481 ntBASIC4.81□□□□□ -1.64
SOX4Q06945 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX4Q06945 AC012671.1-201ENST00000451912 203 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms