Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AC105245.1-201ENST00000581934 244 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AP001269.3-201ENST00000588718 329 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HIST1H1AQ02539 AC119674.1-220ENST00000641502 1048 ntBASIC1.34□□□□□ -2.19
HIST1H1AQ02539 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.2
HIST1H1AQ02539 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 RNU6-217P-201ENST00000384164 104 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 MIR583-201ENST00000384846 75 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC008173.1-201ENST00000418901 264 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC009237.2-201ENST00000421358 284 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC092436.1-201ENST00000506450 503 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC113420.1-201ENST00000507903 571 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AF213884.2-201ENST00000510417 903 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 RANP3-201ENST00000530970 276 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC110588.1-201ENST00000559699 137 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 NRBF2P1-201ENST00000587407 859 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC093673.2-201ENST00000609674 331 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 AC103710.2-201ENST00000609912 942 ntBASIC1.33□□□□□ -2.2
HIST1H1AQ02539 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.33□□□□□ -2.2
HIST1H1AQ02539 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 OR1L1-202ENST00000373686 1083 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 RNU6-19P-201ENST00000384718 107 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 MIR934-201ENST00000401241 83 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 Z86062.1-201ENST00000406773 777 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 U6atac.2-201ENST00000408644 118 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 RNA5SP450-201ENST00000411206 102 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AL133384.1-201ENST00000412744 351 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AC092047.1-201ENST00000424997 240 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 RPL26P6-201ENST00000440913 438 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 BNIP3P2-201ENST00000441221 577 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 RPL23AP16-201ENST00000441715 421 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 RFC5P1-201ENST00000454419 874 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AP1S2P1-201ENST00000457344 379 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AC008834.1-201ENST00000511612 175 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AC024224.1-201ENST00000538284 609 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AC124947.2-202ENST00000552735 133 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 AL161729.4-201ENST00000604650 476 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 LINC02211-204ENST00000642024 1070 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.32□□□□□ -2.2
HIST1H1AQ02539 MTND5P30-201ENST00000452896 1731 ntBASIC1.32□□□□□ -2.2
HIST1H1AQ02539 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 SEC63P2-201ENST00000503863 1939 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 SNORD48-201ENST00000364953 64 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 SNORA70B-201ENST00000384210 135 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AL356421.1-201ENST00000403255 413 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AL512637.2-201ENST00000431287 1256 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 GTF2IP7-202ENST00000436677 309 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 Z82210.1-201ENST00000440037 231 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AC092757.1-201ENST00000467293 467 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AC079203.1-201ENST00000487972 404 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 RPS29P21-201ENST00000496272 170 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 RPL23AP63-201ENST00000498752 471 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 SCARNA15.2-201ENST00000516409 127 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 UBE2L4-201ENST00000587688 464 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AC003001.2-201ENST00000616294 831 ntBASIC1.31□□□□□ -2.2
HIST1H1AQ02539 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HIST1H1AQ02539 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HIST1H1AQ02539 RNU5A-1-201ENST00000362698 116 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 RNU1-72P-201ENST00000362976 153 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 SNORA8-201ENST00000384574 139 ntBASIC1.3□□□□□ -2.2
HIST1H1AQ02539 MIR135A2-201ENST00000384854 100 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms